ECODEvolutionary Classification of Protein Domains

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PDB 7NOC

ELECTRON MICROSCOPY10 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ACapsid protein p27, alternate cleaved 1view chain

1 domain

e7nocA1(A:152-229)

Chain BCapsid protein p27, alternate cleaved 1view chain

2 domains

e7nocB1(B:149-229)e7nocB2(B:10-148)

Chain CCapsid protein p27, alternate cleaved 1view chain

1 domain

e7nocC1(C:10-148)

Chain DCapsid protein p27, alternate cleaved 1view chain

1 domain

e7nocD1(D:152-229)

Chain ECapsid protein p27, alternate cleaved 1view chain

2 domains

e7nocE1(E:149-229)e7nocE2(E:10-148)

Chain FCapsid protein p27, alternate cleaved 1view chain

1 domain

e7nocF1(F:10-148)

Chain GCapsid protein p27, alternate cleaved 1view chain

1 domain

e7nocG1(G:152-229)

Chain HCapsid protein p27, alternate cleaved 1view chain

1 domain

e7nocH1(H:10-148)

Chain ICapsid protein p27, alternate cleaved 1view chain

1 domain

e7nocI1(I:152-229)

Chain JCapsid protein p27, alternate cleaved 1view chain

1 domain

e7nocJ1(J:10-148)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e7nocA1	A:152-229	170.1.1.0	170 → 170.1 → 170.1.1
2	B	e7nocB1	B:149-229	170.1.1.0	170 → 170.1 → 170.1.1
3	B	e7nocB2	B:10-148	Gag_p24	170 → 170.2 → 170.2.1
4	C	e7nocC1	C:10-148	Gag_p24	170 → 170.2 → 170.2.1
5	D	e7nocD1	D:152-229	170.1.1.0	170 → 170.1 → 170.1.1
6	E	e7nocE1	E:149-229	170.1.1.0	170 → 170.1 → 170.1.1
7	E	e7nocE2	E:10-148	Gag_p24	170 → 170.2 → 170.2.1
8	F	e7nocF1	F:10-148	Gag_p24	170 → 170.2 → 170.2.1
9	G	e7nocG1	G:152-229	170.1.1.0	170 → 170.1 → 170.1.1
10	H	e7nocH1	H:10-148	Gag_p24	170 → 170.2 → 170.2.1
11	I	e7nocI1	I:152-229	170.1.1.0	170 → 170.1 → 170.1.1
12	J	e7nocJ1	J:10-148	Gag_p24	170 → 170.2 → 170.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors