ECODEvolutionary Classification of Protein Domains

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PDB 7NPI

X-RAY DIFFRACTION2.81 Å42 chains42 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain aPolyubiquitin-Cview chain

1 domain

e7npia1(a:1-76)

Chain AUbiquitin carboxyl-terminal hydrolase MINDY-2view chain

1 domain

e7npiA1(A:239-500)

Chain bPolyubiquitin-Cview chain

1 domain

e7npib1(b:1-76)

Chain BPolyubiquitin-Cview chain

1 domain

e7npiB1(B:1-73)

Chain cPolyubiquitin-Cview chain

1 domain

e7npic1(c:1-73)

Chain CPolyubiquitin-Cview chain

1 domain

e7npiC1(C:1-76)

Chain dPolyubiquitin-Cview chain

1 domain

e7npid1(d:1-76)

Chain DPolyubiquitin-Cview chain

1 domain

e7npiD1(D:1-76)

Chain eUbiquitin carboxyl-terminal hydrolase MINDY-2view chain

1 domain

e7npie1(e:238-500)

Chain EPolyubiquitin-Cview chain

1 domain

e7npiE1(E:1-75)

Chain fPolyubiquitin-Cview chain

1 domain

e7npif1(f:1-73)

Chain FPolyubiquitin-Cview chain

1 domain

e7npiF1(F:1-76)

Chain gPolyubiquitin-Cview chain

1 domain

e7npig1(g:1-76)

Chain GUbiquitin carboxyl-terminal hydrolase MINDY-2view chain

1 domain

e7npiG1(G:239-500)

Chain hPolyubiquitin-Cview chain

1 domain

e7npih1(h:1-76)

Chain HPolyubiquitin-Cview chain

1 domain

e7npiH1(H:1-73)

Chain iPolyubiquitin-Cview chain

1 domain

e7npii1(i:1-73)

Chain IPolyubiquitin-Cview chain

1 domain

e7npiI1(I:1-76)

Chain jPolyubiquitin-Cview chain

1 domain

e7npij1(j:1-76)

Chain JPolyubiquitin-Cview chain

1 domain

e7npiJ1(J:1-76)

Chain kUbiquitin carboxyl-terminal hydrolase MINDY-2view chain

1 domain

e7npik1(k:238-500)

Chain KPolyubiquitin-Cview chain

1 domain

e7npiK1(K:1-74)

Chain lPolyubiquitin-Cview chain

1 domain

e7npil1(l:1-73)

Chain LPolyubiquitin-Cview chain

1 domain

e7npiL1(L:1-76)

Chain mPolyubiquitin-Cview chain

1 domain

e7npim1(m:1-76)

Chain MUbiquitin carboxyl-terminal hydrolase MINDY-2view chain

1 domain

e7npiM1(M:238-500)

Chain nPolyubiquitin-Cview chain

1 domain

e7npin1(n:1-75)

Chain NPolyubiquitin-Cview chain

1 domain

e7npiN1(N:1-73)

Chain oPolyubiquitin-Cview chain

1 domain

e7npio1(o:1-72)

Chain OPolyubiquitin-Cview chain

1 domain

e7npiO1(O:1-76)

Chain pPolyubiquitin-Cview chain

1 domain

e7npip1(p:1-76)

Chain PPolyubiquitin-Cview chain

1 domain

e7npiP1(P:1-76)

Chain QPolyubiquitin-Cview chain

1 domain

e7npiQ1(Q:1-71)

Chain RPolyubiquitin-Cview chain

1 domain

e7npiR1(R:1-76)

Chain SUbiquitin carboxyl-terminal hydrolase MINDY-2view chain

1 domain

e7npiS1(S:238-500)

Chain TPolyubiquitin-Cview chain

1 domain

e7npiT1(T:1-73)

Chain UPolyubiquitin-Cview chain

1 domain

e7npiU1(U:1-76)

Chain VPolyubiquitin-Cview chain

1 domain

e7npiV1(V:1-76)

Chain WPolyubiquitin-Cview chain

1 domain

e7npiW1(W:1-72)

Chain XPolyubiquitin-Cview chain

1 domain

e7npiX1(X:1-76)

Chain YUbiquitin carboxyl-terminal hydrolase MINDY-2view chain

1 domain

e7npiY1(Y:238-500)

Chain ZPolyubiquitin-Cview chain

1 domain

e7npiZ1(Z:1-73)

All Domains (42)

#	Chain	Domain ID	Range	Family	Classification
1	a	e7npia1	a:1-76	ubiquitin	221 → 221.1 → 221.1.1
2	A	e7npiA1	A:239-500	MINDY_DUB	219 → 219.1 → 219.1.1
3	b	e7npib1	b:1-76	ubiquitin	221 → 221.1 → 221.1.1
4	B	e7npiB1	B:1-73	ubiquitin	221 → 221.1 → 221.1.1
5	c	e7npic1	c:1-73	ubiquitin	221 → 221.1 → 221.1.1
6	C	e7npiC1	C:1-76	ubiquitin	221 → 221.1 → 221.1.1
7	d	e7npid1	d:1-76	ubiquitin	221 → 221.1 → 221.1.1
8	D	e7npiD1	D:1-76	ubiquitin	221 → 221.1 → 221.1.1
9	e	e7npie1	e:238-500	MINDY_DUB	219 → 219.1 → 219.1.1
10	E	e7npiE1	E:1-75	ubiquitin	221 → 221.1 → 221.1.1
11	f	e7npif1	f:1-73	ubiquitin	221 → 221.1 → 221.1.1
12	F	e7npiF1	F:1-76	ubiquitin	221 → 221.1 → 221.1.1
13	g	e7npig1	g:1-76	ubiquitin	221 → 221.1 → 221.1.1
14	G	e7npiG1	G:239-500	MINDY_DUB	219 → 219.1 → 219.1.1
15	h	e7npih1	h:1-76	ubiquitin	221 → 221.1 → 221.1.1
16	H	e7npiH1	H:1-73	ubiquitin	221 → 221.1 → 221.1.1
17	i	e7npii1	i:1-73	ubiquitin	221 → 221.1 → 221.1.1
18	I	e7npiI1	I:1-76	ubiquitin	221 → 221.1 → 221.1.1
19	j	e7npij1	j:1-76	ubiquitin	221 → 221.1 → 221.1.1
20	J	e7npiJ1	J:1-76	ubiquitin	221 → 221.1 → 221.1.1
21	k	e7npik1	k:238-500	MINDY_DUB	219 → 219.1 → 219.1.1
22	K	e7npiK1	K:1-74	ubiquitin	221 → 221.1 → 221.1.1
23	l	e7npil1	l:1-73	ubiquitin	221 → 221.1 → 221.1.1
24	L	e7npiL1	L:1-76	ubiquitin	221 → 221.1 → 221.1.1
25	m	e7npim1	m:1-76	ubiquitin	221 → 221.1 → 221.1.1
26	M	e7npiM1	M:238-500	MINDY_DUB	219 → 219.1 → 219.1.1
27	n	e7npin1	n:1-75	ubiquitin	221 → 221.1 → 221.1.1
28	N	e7npiN1	N:1-73	ubiquitin	221 → 221.1 → 221.1.1
29	o	e7npio1	o:1-72	ubiquitin	221 → 221.1 → 221.1.1
30	O	e7npiO1	O:1-76	ubiquitin	221 → 221.1 → 221.1.1
31	p	e7npip1	p:1-76	ubiquitin	221 → 221.1 → 221.1.1
32	P	e7npiP1	P:1-76	ubiquitin	221 → 221.1 → 221.1.1
33	Q	e7npiQ1	Q:1-71	ubiquitin	221 → 221.1 → 221.1.1
34	R	e7npiR1	R:1-76	ubiquitin	221 → 221.1 → 221.1.1
35	S	e7npiS1	S:238-500	MINDY_DUB	219 → 219.1 → 219.1.1
36	T	e7npiT1	T:1-73	ubiquitin	221 → 221.1 → 221.1.1
37	U	e7npiU1	U:1-76	ubiquitin	221 → 221.1 → 221.1.1
38	V	e7npiV1	V:1-76	ubiquitin	221 → 221.1 → 221.1.1
39	W	e7npiW1	W:1-72	ubiquitin	221 → 221.1 → 221.1.1
40	X	e7npiX1	X:1-76	ubiquitin	221 → 221.1 → 221.1.1
41	Y	e7npiY1	Y:238-500	MINDY_DUB	219 → 219.1 → 219.1.1
42	Z	e7npiZ1	Z:1-73	ubiquitin	221 → 221.1 → 221.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors