ECODEvolutionary Classification of Protein Domains

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PDB 7Y7M

ELECTRON MICROSCOPY6 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ACapsid protein VP1view chain

1 domain

e7y7mA1(A:2-297)

Chain BCapsid protein VP2view chain

1 domain

e7y7mB1(B:10-254)

Chain CCapsid protein VP3view chain

1 domain

e7y7mC1(C:1-242)

Chain DCapsid protein VP4view chain

1 domain

e7y7mD1(D:12-69)

Chain FThe heavy chain of fab 8C4view chain

2 domains

e7y7mF1(F:118-214)e7y7mF2(F:1-117)

Chain GThe light chain of fab 8C4view chain

2 domains

e7y7mG1(G:1-108)e7y7mG2(G:109-213)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e7y7mA1	A:2-297	Rhv_5	10 → 10.2 → 10.2.1
2	B	e7y7mB1	B:10-254	Rhv	10 → 10.2 → 10.2.1
3	C	e7y7mC1	C:1-242	Rhv	10 → 10.2 → 10.2.1
4	D	e7y7mD1	D:12-69	Pico_P1A	10 → 10.2 → 10.2.1
5	F	e7y7mF1	F:118-214	C1-set	11 → 11.1 → 11.1.1
6	F	e7y7mF2	F:1-117	V-set	11 → 11.1 → 11.1.1
7	G	e7y7mG1	G:1-108	V-set	11 → 11.1 → 11.1.1
8	G	e7y7mG2	G:109-213	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors