ECODEvolutionary Classification of Protein Domains

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PDB 7ZQD

ELECTRON MICROSCOPY40 chains44 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqd11(1:35-228)

Chain 12Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqd121(12:35-228)

Chain 3Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqd31(3:38-264)

Chain 32Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqd321(32:38-264)

Chain 4Chlorophyll a-b binding protein, chloroplastic (Lhca4)view chain

1 domain

e7zqd41(4:53-264)

Chain 42Chlorophyll a-b binding protein, chloroplastic (Lhca4)view chain

1 domain

e7zqd421(42:53-264)

Chain 5Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqd51(5:31-257)

Chain 52Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqd521(52:31-257)

Chain 6Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqd61(6:28-257)

Chain 62Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqd621(62:28-257)

Chain 7Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqd71(7:29-241)

Chain 72Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqd721(72:29-241)

Chain 8Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqd81(8:27-243)

Chain 82Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqd821(82:27-243)

Chain 9Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqd91(9:27-212)

Chain 92Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqd921(92:27-212)

Chain APhotosystem I P700 chlorophyll a apoprotein A1view chain

2 domains

e7zqdA1(A:415-751)e7zqdA2(A:10-414)

Chain A2Photosystem I P700 chlorophyll a apoprotein A1view chain

2 domains

e7zqdA21(A2:10-414)e7zqdA22(A2:415-751)

Chain BPhotosystem I P700 chlorophyll a apoprotein A2view chain

2 domains

e7zqdB1(B:406-735)e7zqdB2(B:3-405)

Chain B2Photosystem I P700 chlorophyll a apoprotein A2view chain

2 domains

e7zqdB21(B2:406-735)e7zqdB22(B2:3-405)

Chain CPhotosystem I iron-sulfur centerview chain

1 domain

e7zqdC1(C:2-81)

Chain C2Photosystem I iron-sulfur centerview chain

1 domain

e7zqdC21(C2:2-81)

Chain DPhotosystem I reaction center subunit II, chloroplasticview chain

1 domain

e7zqdD1(D:53-196)

Chain D2Photosystem I reaction center subunit II, chloroplasticview chain

1 domain

e7zqdD21(D2:53-196)

Chain EPhotosystem I reaction center subunit IV, chloroplasticview chain

1 domain

e7zqdE1(E:34-97)

Chain E2Photosystem I reaction center subunit IV, chloroplasticview chain

1 domain

e7zqdE21(E2:34-97)

Chain FPhotosystem I reaction center subunit III, chloroplasticview chain

1 domain

e7zqdF1(F:63-227)

Chain F2Photosystem I reaction center subunit III, chloroplasticview chain

1 domain

e7zqdF21(F2:63-227)

Chain GPhotosystem I reaction center subunit V, chloroplasticview chain

1 domain

e7zqdG1(G:32-59,G:84-126)

Chain G2Photosystem I reaction center subunit V, chloroplasticview chain

1 domain

e7zqdG21(G2:32-59,G2:84-126)

Chain IPhotosystem I reaction center subunit VIIIview chain

1 domain

e7zqdI1(I:68-104)

Chain I2Photosystem I reaction center subunit VIIIview chain

1 domain

e7zqdI21(I2:68-104)

Chain JPhotosystem I reaction center subunit IXview chain

1 domain

e7zqdJ1(J:1-40)

Chain J2Photosystem I reaction center subunit IXview chain

1 domain

e7zqdJ21(J2:1-40)

Chain KPhotosystem I reaction center subunit psaK, chloroplasticview chain

1 domain

e7zqdK1(K:28-113)

Chain K2Photosystem I reaction center subunit psaK, chloroplasticview chain

1 domain

e7zqdK21(K2:28-113)

Chain LPSI subunit Vview chain

1 domain

e7zqdL1(L:53-190)

Chain L2PSI subunit Vview chain

1 domain

e7zqdL21(L2:53-190)

Chain ZChlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqdZ1(Z:35-228)

Chain Z2Chlorophyll a-b binding protein, chloroplasticview chain

1 domain

e7zqdZ21(Z2:35-228)

All Domains (44)

#	Chain	Domain ID	Range	Family	Classification
1	1	e7zqd11	1:35-228	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
2	12	e7zqd121	12:35-228	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
3	3	e7zqd31	3:38-264	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
4	32	e7zqd321	32:38-264	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
5	4	e7zqd41	4:53-264	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
6	42	e7zqd421	42:53-264	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
7	5	e7zqd51	5:31-257	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
8	52	e7zqd521	52:31-257	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
9	6	e7zqd61	6:28-257	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
10	62	e7zqd621	62:28-257	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
11	7	e7zqd71	7:29-241	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
12	72	e7zqd721	72:29-241	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
13	8	e7zqd81	8:27-243	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
14	82	e7zqd821	82:27-243	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
15	9	e7zqd91	9:27-212	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
16	92	e7zqd921	92:27-212	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
17	A	e7zqdA1	A:415-751	PsaA_PsaB	5037 → 5037.1 → 5037.1.1
18	A	e7zqdA2	A:10-414	PsaA_PsaB	5075 → 5075.1 → 5075.1.1
19	A2	e7zqdA21	A2:10-414	PsaA_PsaB	5075 → 5075.1 → 5075.1.1
20	A2	e7zqdA22	A2:415-751	PsaA_PsaB	5037 → 5037.1 → 5037.1.1
21	B	e7zqdB1	B:406-735	PsaA_PsaB	5037 → 5037.1 → 5037.1.1
22	B	e7zqdB2	B:3-405	PsaA_PsaB	5075 → 5075.1 → 5075.1.1
23	B2	e7zqdB21	B2:406-735	PsaA_PsaB	5037 → 5037.1 → 5037.1.1
24	B2	e7zqdB22	B2:3-405	PsaA_PsaB	5075 → 5075.1 → 5075.1.1
25	C	e7zqdC1	C:2-81	Fer4+Fer4_7	205 → 205.1 → 205.1.1
26	C2	e7zqdC21	C2:2-81	Fer4+Fer4_7	205 → 205.1 → 205.1.1
27	D	e7zqdD1	D:53-196	PsaD	834 → 834.1 → 834.1.1
28	D2	e7zqdD21	D2:53-196	PsaD	834 → 834.1 → 834.1.1
29	E	e7zqdE1	E:34-97	PSI_PsaE	4 → 4.1 → 4.1.1
30	E2	e7zqdE21	E2:34-97	PSI_PsaE	4 → 4.1 → 4.1.1
31	F	e7zqdF1	F:63-227	PSI_PsaF	5019 → 5019.1 → 5019.1.1
32	F2	e7zqdF21	F2:63-227	PSI_PsaF	5019 → 5019.1 → 5019.1.1
33	G	e7zqdG1	G:32-59,G:84-126	PSI_PSAK	5063 → 5063.1 → 5063.1.1
34	G2	e7zqdG21	G2:32-59,G2:84-126	PSI_PSAK	5063 → 5063.1 → 5063.1.1
35	I	e7zqdI1	I:68-104	PSI_8	5020 → 5020.1 → 5020.1.1
36	I2	e7zqdI21	I2:68-104	PSI_8	5020 → 5020.1 → 5020.1.1
37	J	e7zqdJ1	J:1-40	PSI_PsaJ	5021 → 5021.1 → 5021.1.1
38	J2	e7zqdJ21	J2:1-40	PSI_PsaJ	5021 → 5021.1 → 5021.1.1
39	K	e7zqdK1	K:28-113	PSI_PSAK	5063 → 5063.1 → 5063.1.1
40	K2	e7zqdK21	K2:28-113	PSI_PSAK	5063 → 5063.1 → 5063.1.1
41	L	e7zqdL1	L:53-190	PsaL	5064 → 5064.1 → 5064.1.1
42	L2	e7zqdL21	L2:53-190	PsaL	5064 → 5064.1 → 5064.1.1
43	Z	e7zqdZ1	Z:35-228	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
44	Z2	e7zqdZ21	Z2:35-228	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors