ECODEvolutionary Classification of Protein Domains

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PDB 8BEB

X-RAY DIFFRACTION3.18 Å4 chains5 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AElongin-Bview chain

1 domain

e8bebA1(A:1-104)

Chain BElongin-Cview chain

1 domain

e8bebB1(B:17-112)

Chain Cvon Hippel-Lindau disease tumor suppressorview chain

2 domains

e8bebC1(C:155-202)e8bebC2(C:62-154)

Chain DBromodomain-containing protein 4view chain

1 domain

e8bebD1(D:44-167)

All Domains (5)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8bebA1	A:1-104	ubiquitin	221 → 221.1 → 221.1.1
2	B	e8bebB1	B:17-112	Skp1_POZ	226 → 226.1 → 226.1.1
3	C	e8bebC1	C:155-202	VHL_C	4215 → 4215.1 → 4215.1.1
4	C	e8bebC2	C:62-154	VHL	11 → 11.1 → 11.1.4
5	D	e8bebD1	D:44-167	Bromodomain	633 → 633.1 → 633.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors