ECODEvolutionary Classification of Protein Domains

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PDB 8BEF

ELECTRON MICROSCOPY22 chains16 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain aNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1view chain

1 domain

e8befa1(a:3-60)

Chain ANADH-ubiquinone oxidoreductase chain 3view chain

1 domain

e8befA1(A:2-34,A:55-117)

Chain eNADH dehydrogenase [ubiquinone] iron-sulfur protein 5-Bview chain

1 domain

e8befe1(e:2-65)

Chain HNADH-ubiquinone oxidoreductase chain 1view chain

1 domain

e8befH1(H:2-325)

Chain JNADH-ubiquinone oxidoreductase chain 6view chain

1 domain

e8befJ1(J:1-77,J:105-174)

Chain KNADH-ubiquinone oxidoreductase chain 4Lview chain

1 domain

e8befK1(K:1-100)

Chain LNADH-ubiquinone oxidoreductase chain 5view chain

1 domain

e8befL1(L:1-589)

Chain MNADH-ubiquinone oxidoreductase chain 4view chain

1 domain

e8befM1(M:9-495)

Chain NNADH-ubiquinone oxidoreductase chain 2view chain

1 domain

e8befN1(N:12-499)

Chain OAT3G07480.1view chain

1 domain

e8befO1(O:37-159)

Chain xGamma carbonic anhydrase-like 2, mitochondrialview chain

1 domain

e8befx1(x:44-232)

Chain XNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-Bview chain

2 domains

e8befX1(X:9-62)e8befX2(X:63-106)

Chain yGamma carbonic anhydrase 2, mitochondrialview chain

1 domain

e8befy1(y:62-212)

Chain zGamma carbonic anhydrase 1, mitochondrialview chain

1 domain

e8befz1(z:62-214)

Chain ZNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-Aview chain

1 domain

e8befZ1(Z:46-143)

All Domains (16)

#	Chain	Domain ID	Range	Family	Classification
1	a	e8befa1	a:3-60	MWFE	1126 → 1126.1 → 1126.1.1
2	A	e8befA1	A:2-34,A:55-117	Oxidored_q4	3456 → 3456.1 → 3456.1.1
3	e	e8befe1	e:2-65	Ndufs5	5071 → 5071.2 → 5071.2.1
4	H	e8befH1	H:2-325	NADHdh	3281 → 3281.1 → 3281.1.2
5	J	e8befJ1	J:1-77,J:105-174	Oxidored_q3	3579 → 3579.1 → 3579.1.1
6	K	e8befK1	K:1-100	Oxidored_q2	3843 → 3843.1 → 3843.1.1
7	L	e8befL1	L:1-589	Proton_antipo_M,Proton_antipo_N	3281 → 3281.1 → 3281.1.1
8	M	e8befM1	M:9-495	Proton_antipo_M	3281 → 3281.1 → 3281.1.1
9	N	e8befN1	N:12-499	Proton_antipo_M	3281 → 3281.1 → 3281.1.1
10	O	e8befO1	O:37-159	221.1.1.0	221 → 221.1 → 221.1.1
11	x	e8befx1	x:44-232	208.1.1.0	208 → 208.1 → 208.1.1
12	X	e8befX1	X:9-62	568.1.1.0	568 → 568.1 → 568.1.1
13	X	e8befX2	X:63-106	CHCH	568 → 568.1 → 568.1.1
14	y	e8befy1	y:62-212	Hexapep,Hexapep_2	208 → 208.1 → 208.1.1
15	z	e8befz1	z:62-214	Hexapep_2	208 → 208.1 → 208.1.1
16	Z	e8befZ1	Z:46-143	GRIM-19	1132 → 1132.1 → 1132.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors