ECODEvolutionary Classification of Protein Domains

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PDB 8CME

X-RAY DIFFRACTION2.26 Å9 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AHLA class II histocompatibility antigen, DR alpha chainview chain

2 domains

e8cmeA1(A:82-182)e8cmeA2(A:1-81)

Chain BHuman leukocyte antigen DR beta chain allotype DR1 (DRB1*0101)view chain

2 domains

e8cmeB1(B:0-91)e8cmeB2(B:92-190)

Chain DHLA class II histocompatibility antigen, DR alpha chainview chain

2 domains

e8cmeD1(D:82-182)e8cmeD2(D:2-81)

Chain EHuman leukocyte antigen DR beta chain allotype DR1 (DRB1*0101)view chain

2 domains

e8cmeE1(E:0-91)e8cmeE2(E:92-190)

Chain GHLA class II histocompatibility antigen, DR alpha chainview chain

2 domains

e8cmeG1(G:1-81)e8cmeG2(G:82-182)

Chain HHuman leukocyte antigen DR beta chain allotype DR1 (DRB1*0101)view chain

2 domains

e8cmeH1(H:0-91)e8cmeH2(H:92-190)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8cmeA1	A:82-182	C1-set	11 → 11.1 → 11.1.1
2	A	e8cmeA2	A:1-81	MHC_II_alpha	233 → 233.1 → 233.1.1
3	B	e8cmeB1	B:0-91	MHC_II_beta	233 → 233.1 → 233.1.1
4	B	e8cmeB2	B:92-190	C1-set	11 → 11.1 → 11.1.1
5	D	e8cmeD1	D:82-182	C1-set	11 → 11.1 → 11.1.1
6	D	e8cmeD2	D:2-81	MHC_II_alpha	233 → 233.1 → 233.1.1
7	E	e8cmeE1	E:0-91	MHC_II_beta	233 → 233.1 → 233.1.1
8	E	e8cmeE2	E:92-190	C1-set	11 → 11.1 → 11.1.1
9	G	e8cmeG1	G:1-81	MHC_II_alpha	233 → 233.1 → 233.1.1
10	G	e8cmeG2	G:82-182	C1-set	11 → 11.1 → 11.1.1
11	H	e8cmeH1	H:0-91	MHC_II_beta	233 → 233.1 → 233.1.1
12	H	e8cmeH2	H:92-190	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors