ECODEvolutionary Classification of Protein Domains

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PDB 8CMI

X-RAY DIFFRACTION2.60 Å9 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AHLA class II histocompatibility antigen, DR alpha chainview chain

2 domains

e8cmiA1(A:82-182)e8cmiA2(A:0-81)

Chain BHuman leukocyte antigen DR beta chain allotype DR1 (DRB1*0101)view chain

2 domains

e8cmiB1(B:92-190)e8cmiB2(B:0-91)

Chain DHLA class II histocompatibility antigen, DR alpha chainview chain

2 domains

e8cmiD1(D:2-81)e8cmiD2(D:82-182)

Chain EHuman leukocyte antigen DR beta chain allotype DR1 (DRB1*0101)view chain

2 domains

e8cmiE1(E:0-91)e8cmiE2(E:92-190)

Chain GHLA class II histocompatibility antigen, DR alpha chainview chain

2 domains

e8cmiG1(G:2-81)e8cmiG2(G:82-182)

Chain HHuman leukocyte antigen DR beta chain allotype DR1 (DRB1*0101)view chain

2 domains

e8cmiH1(H:92-190)e8cmiH2(H:0-91)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8cmiA1	A:82-182	C1-set	11 → 11.1 → 11.1.1
2	A	e8cmiA2	A:0-81	MHC_II_alpha	233 → 233.1 → 233.1.1
3	B	e8cmiB1	B:92-190	C1-set	11 → 11.1 → 11.1.1
4	B	e8cmiB2	B:0-91	MHC_II_beta	233 → 233.1 → 233.1.1
5	D	e8cmiD1	D:2-81	MHC_II_alpha	233 → 233.1 → 233.1.1
6	D	e8cmiD2	D:82-182	C1-set	11 → 11.1 → 11.1.1
7	E	e8cmiE1	E:0-91	MHC_II_beta	233 → 233.1 → 233.1.1
8	E	e8cmiE2	E:92-190	C1-set	11 → 11.1 → 11.1.1
9	G	e8cmiG1	G:2-81	MHC_II_alpha	233 → 233.1 → 233.1.1
10	G	e8cmiG2	G:82-182	C1-set	11 → 11.1 → 11.1.1
11	H	e8cmiH1	H:92-190	C1-set	11 → 11.1 → 11.1.1
12	H	e8cmiH2	H:0-91	MHC_II_beta	233 → 233.1 → 233.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors