ECODEvolutionary Classification of Protein Domains

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PDB 8CSP

ELECTRON MICROSCOPY33 chains39 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 028S ribosomal protein S34, mitochondrialview chain

1 domain

e8csp01(0:6-216)

Chain 128S ribosomal protein S35, mitochondrialview chain

1 domain

e8csp11(1:53-323)

Chain 4Pentatricopeptide repeat domain-containing protein 3, mitochondrialview chain

2 domains

e8csp41(4:244-376)e8csp42(4:442-639)

Chain 5Dimethyladenosine transferase 1, mitochondrialview chain

2 domains

e8csp51(5:237-328)e8csp52(5:10-236)

Chain 8Malonyl-CoA-acyl carrier protein transacylase, mitochondrialview chain

2 domains

e8csp81(8:56-186,8:265-381)e8csp82(8:187-264)

Chain 9Nitric oxide-associated protein 1view chain

3 domains

e8csp901(9:207-392)e8csp902(9:494-566)e8csp903(9:567-660)

Chain aGTPase Era, mitochondrialview chain

2 domains

e8cspa1(a:337-437)e8cspa2(a:111-258,a:301-336)

Chain B28S ribosomal protein S2, mitochondrialview chain

1 domain

e8cspB1(B:55-274)

Chain C28S ribosomal protein S24, mitochondrialview chain

1 domain

e8cspC1(C:19-25,C:49-167)

Chain D28S ribosomal protein S5, mitochondrialview chain

2 domains

e8cspD1(D:287-430)e8cspD2(D:190-286)

Chain E28S ribosomal protein S6, mitochondrialview chain

1 domain

e8cspE1(E:2-106)

Chain F28S ribosomal protein S7, mitochondrialview chain

1 domain

e8cspF1(F:35-242)

Chain G28S ribosomal protein S9, mitochondrialview chain

1 domain

e8cspG1(G:68-175,G:197-379)

Chain H28S ribosomal protein S10, mitochondrialview chain

1 domain

e8cspH1(H:50-189)

Chain J28S ribosomal protein S12, mitochondrialview chain

1 domain

e8cspJ1(J:31-138)

Chain K28S ribosomal protein S14, mitochondrialview chain

1 domain

e8cspK1(K:28-128)

Chain L28S ribosomal protein S15, mitochondrialview chain

1 domain

e8cspL1(L:65-195)

Chain M28S ribosomal protein S16, mitochondrialview chain

1 domain

e8cspM1(M:10-124)

Chain N28S ribosomal protein S17, mitochondrialview chain

1 domain

e8cspN1(N:4-112)

Chain O28S ribosomal protein S18b, mitochondrialview chain

1 domain

e8cspO1(O:48-237)

Chain P28S ribosomal protein S18c, mitochondrialview chain

1 domain

e8cspP1(P:47-138)

Chain Q28S ribosomal protein S21, mitochondrialview chain

1 domain

e8cspQ01(Q:1-87)

Chain R28S ribosomal protein S22, mitochondrialview chain

1 domain

e8cspR1(R:66-356)

Chain S28S ribosomal protein S23, mitochondrialview chain

1 domain

e8cspS1(S:2-134)

Chain T28S ribosomal protein S25, mitochondrialview chain

1 domain

e8cspT1(T:2-165)

Chain U28S ribosomal protein S26, mitochondrialview chain

1 domain

e8cspU1(U:27-200)

Chain V28S ribosomal protein S27, mitochondrialview chain

1 domain

e8cspV1(V:29-291,V:312-406)

Chain W28S ribosomal protein S28, mitochondrialview chain

1 domain

e8cspW1(W:77-174)

Chain X28S ribosomal protein S29, mitochondrialview chain

2 domains

e8cspX1(X:47-346)e8cspX2(X:347-398)

Chain Y28S ribosomal protein S31, mitochondrialview chain

1 domain

e8cspY1(Y:276-383)

Chain Z28S ribosomal protein S33, mitochondrialview chain

1 domain

e8cspZ1(Z:4-72)

All Domains (39)

#	Chain	Domain ID	Range	Family	Classification
1	0	e8csp01	0:6-216	MRP-S34	4 → 4.27 → 4.27.1
2	1	e8csp11	1:53-323	MRP-S28	330 → 330.3 → 330.3.1
3	4	e8csp41	4:244-376	PPR_2, PPR_3, PPR_long	109 → 109.4 → 109.4.1
4	4	e8csp42	4:442-639	109.4.1.0	109 → 109.4 → 109.4.1
5	5	e8csp51	5:237-328	102.2.1.0	102 → 102.2 → 102.2.1
6	5	e8csp52	5:10-236	RrnaAD	2003 → 2003.1 → 2003.1.5
7	8	e8csp81	8:56-186,8:265-381	Acyl_transf_1	2007 → 2007.1 → 2007.1.19
8	8	e8csp82	8:187-264	304.11.1.0	304 → 304.11 → 304.11.1
9	9	e8csp901	9:207-392	MMR_HSR1	2004 → 2004.1 → 2004.1.1
10	9	e8csp902	9:494-566	2004.1.1.0	2004 → 2004.1 → 2004.1.1
11	9	e8csp903	9:567-660	YqeH-like_C	3249 → 3249.1 → 3249.1.1
12	a	e8cspa1	a:337-437	327.11.1.0	327 → 327.11 → 327.11.1
13	a	e8cspa2	a:111-258,a:301-336	MMR_HSR1	2004 → 2004.1 → 2004.1.1
14	B	e8cspB1	B:55-274	Ribosomal_S2	2007 → 2007.6 → 2007.6.1
15	C	e8cspC1	C:19-25,C:49-167	MRP-S24	327 → 327.11 → 327.11.1
16	D	e8cspD1	D:287-430	Ribosomal_S5_C	212 → 212.1 → 212.1.1
17	D	e8cspD2	D:190-286	Ribosomal_S5	330 → 330.1 → 330.1.1
18	E	e8cspE1	E:2-106	Ribosomal_S6	304 → 304.12 → 304.12.1
19	F	e8cspF1	F:35-242	Ribosomal_S7	167 → 167.1 → 167.1.1
20	G	e8cspG1	G:68-175,G:197-379	Ribosomal_S9	212 → 212.1 → 212.1.1
21	H	e8cspH1	H:50-189	Ribosomal_S10	304 → 304.44 → 304.44.1
22	J	e8cspJ1	J:31-138	Ribosom_S12_S23	2 → 2.1 → 2.1.1
23	K	e8cspK1	K:28-128	Ribosomal_S14	377 → 377.1 → 377.1.1
24	L	e8cspL1	L:65-195	Ribosomal_S15	616 → 616.1 → 616.1.1
25	M	e8cspM1	M:10-124	Ribosomal_S16	837 → 837.1 → 837.1.1
26	N	e8cspN1	N:4-112	Ribosomal_S17	2 → 2.1 → 2.1.1
27	O	e8cspO1	O:48-237	Ribosomal_S18	101 → 101.1 → 101.1.1
28	P	e8cspP1	P:47-138	Ribosomal_S18	101 → 101.1 → 101.1.1
29	Q	e8cspQ01	Q:1-87	Ribosomal_S21	3666 → 3666.1 → 3666.1.1
30	R	e8cspR1	R:66-356	MRP-S22	3966 → 3966.1 → 3966.1.1
31	S	e8cspS1	S:2-134	MRP-S23	103 → 103.15 → 103.15.1
32	T	e8cspT1	T:2-165	L51_S25_CI-B8	2485 → 2485.1 → 2485.1.1
33	U	e8cspU1	U:27-200	MRP-S26	3967 → 3967.1 → 3967.1.1
34	V	e8cspV1	V:29-291,V:312-406	MRP-S27	109 → 109.4 → 109.4.1
35	W	e8cspW1	W:77-174	MRP-S35	2 → 2.1 → 2.1.1
36	X	e8cspX1	X:47-346	DAP3	2004 → 2004.1 → 2004.1.1
37	X	e8cspX2	X:347-398	DAP3	148 → 148.1 → 148.1.3
38	Y	e8cspY1	Y:276-383	MRP-S31	3968 → 3968.1 → 3968.1.1
39	Z	e8cspZ1	Z:4-72	MRP-S33	3969 → 3969.1 → 3969.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors