ECODEvolutionary Classification of Protein Domains

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PDB 8CSU

ELECTRON MICROSCOPY33 chains35 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 028S ribosomal protein S34, mitochondrialview chain

1 domain

e8csu01(0:6-216)

Chain 128S ribosomal protein S35, mitochondrialview chain

1 domain

e8csu11(1:53-323)

Chain 3Aurora kinase A-interacting proteinview chain

1 domain

e8csu31(3:153-197)

Chain 4Pentatricopeptide repeat domain-containing protein 3, mitochondrialview chain

2 domains

e8csu41(4:244-376)e8csu42(4:442-639)

Chain 5Dimethyladenosine transferase 1, mitochondrialview chain

2 domains

e8csu51(5:237-328)e8csu52(5:10-236)

Chain 6Putative ribosome-binding factor A, mitochondrialview chain

1 domain

e8csu61(6:42-50,6:90-206)

Chain B28S ribosomal protein S2, mitochondrialview chain

1 domain

e8csuB1(B:55-274)

Chain C28S ribosomal protein S24, mitochondrialview chain

1 domain

e8csuC1(C:19-25,C:49-167)

Chain D28S ribosomal protein S5, mitochondrialview chain

2 domains

e8csuD1(D:287-430)e8csuD2(D:190-286)

Chain E28S ribosomal protein S6, mitochondrialview chain

1 domain

e8csuE1(E:2-109)

Chain F28S ribosomal protein S7, mitochondrialview chain

1 domain

e8csuF1(F:35-240)

Chain G28S ribosomal protein S9, mitochondrialview chain

1 domain

e8csuG1(G:68-175,G:197-379)

Chain H28S ribosomal protein S10, mitochondrialview chain

1 domain

e8csuH1(H:50-189)

Chain I28S ribosomal protein S11, mitochondrialview chain

1 domain

e8csuI1(I:58-194)

Chain J28S ribosomal protein S12, mitochondrialview chain

1 domain

e8csuJ1(J:31-138)

Chain K28S ribosomal protein S14, mitochondrialview chain

1 domain

e8csuK1(K:28-127)

Chain L28S ribosomal protein S15, mitochondrialview chain

1 domain

e8csuL1(L:65-225)

Chain M28S ribosomal protein S16, mitochondrialview chain

1 domain

e8csuM1(M:10-124)

Chain N28S ribosomal protein S17, mitochondrialview chain

1 domain

e8csuN1(N:4-112)

Chain O28S ribosomal protein S18b, mitochondrialview chain

1 domain

e8csuO1(O:48-237)

Chain P28S ribosomal protein S18c, mitochondrialview chain

1 domain

e8csuP1(P:47-142)

Chain Q28S ribosomal protein S21, mitochondrialview chain

1 domain

e8csuQ1(Q:2-87)

Chain R28S ribosomal protein S22, mitochondrialview chain

1 domain

e8csuR1(R:66-356)

Chain S28S ribosomal protein S23, mitochondrialview chain

1 domain

e8csuS1(S:2-134)

Chain T28S ribosomal protein S25, mitochondrialview chain

1 domain

e8csuT1(T:2-165)

Chain U28S ribosomal protein S26, mitochondrialview chain

1 domain

e8csuU1(U:27-200)

Chain V28S ribosomal protein S27, mitochondrialview chain

1 domain

e8csuV1(V:29-291,V:312-406)

Chain W28S ribosomal protein S28, mitochondrialview chain

1 domain

e8csuW1(W:77-174)

Chain X28S ribosomal protein S29, mitochondrialview chain

2 domains

e8csuX1(X:347-398)e8csuX2(X:47-346)

Chain Y28S ribosomal protein S31, mitochondrialview chain

1 domain

e8csuY1(Y:276-383)

Chain Z28S ribosomal protein S33, mitochondrialview chain

1 domain

e8csuZ1(Z:4-72)

All Domains (35)

#	Chain	Domain ID	Range	Family	Classification
1	0	e8csu01	0:6-216	MRP-S34	4 → 4.27 → 4.27.1
2	1	e8csu11	1:53-323	MRP-S28	330 → 330.3 → 330.3.1
3	3	e8csu31	3:153-197	3970.1.1.0	3970 → 3970.1 → 3970.1.1
4	4	e8csu41	4:244-376	PPR_2, PPR_3, PPR_long	109 → 109.4 → 109.4.1
5	4	e8csu42	4:442-639	109.4.1.0	109 → 109.4 → 109.4.1
6	5	e8csu51	5:237-328	102.2.1.0	102 → 102.2 → 102.2.1
7	5	e8csu52	5:10-236	RrnaAD	2003 → 2003.1 → 2003.1.5
8	6	e8csu61	6:42-50,6:90-206	RBFA	327 → 327.10 → 327.10.1
9	B	e8csuB1	B:55-274	Ribosomal_S2	2007 → 2007.6 → 2007.6.1
10	C	e8csuC1	C:19-25,C:49-167	MRP-S24	327 → 327.11 → 327.11.1
11	D	e8csuD1	D:287-430	Ribosomal_S5_C	212 → 212.1 → 212.1.1
12	D	e8csuD2	D:190-286	Ribosomal_S5	330 → 330.1 → 330.1.1
13	E	e8csuE1	E:2-109	Ribosomal_S6	304 → 304.12 → 304.12.1
14	F	e8csuF1	F:35-240	Ribosomal_S7	167 → 167.1 → 167.1.1
15	G	e8csuG1	G:68-175,G:197-379	Ribosomal_S9	212 → 212.1 → 212.1.1
16	H	e8csuH1	H:50-189	Ribosomal_S10	304 → 304.44 → 304.44.1
17	I	e8csuI1	I:58-194	Ribosomal_S11	2484 → 2484.1 → 2484.1.1
18	J	e8csuJ1	J:31-138	Ribosom_S12_S23	2 → 2.1 → 2.1.1
19	K	e8csuK1	K:28-127	Ribosomal_S14	377 → 377.1 → 377.1.1
20	L	e8csuL1	L:65-225	Ribosomal_S15	616 → 616.1 → 616.1.1
21	M	e8csuM1	M:10-124	Ribosomal_S16	837 → 837.1 → 837.1.1
22	N	e8csuN1	N:4-112	Ribosomal_S17	2 → 2.1 → 2.1.1
23	O	e8csuO1	O:48-237	Ribosomal_S18	101 → 101.1 → 101.1.1
24	P	e8csuP1	P:47-142	Ribosomal_S18	101 → 101.1 → 101.1.1
25	Q	e8csuQ1	Q:2-87	Ribosomal_S21	3666 → 3666.1 → 3666.1.1
26	R	e8csuR1	R:66-356	MRP-S22	3966 → 3966.1 → 3966.1.1
27	S	e8csuS1	S:2-134	MRP-S23	103 → 103.15 → 103.15.1
28	T	e8csuT1	T:2-165	L51_S25_CI-B8	2485 → 2485.1 → 2485.1.1
29	U	e8csuU1	U:27-200	MRP-S26	3967 → 3967.1 → 3967.1.1
30	V	e8csuV1	V:29-291,V:312-406	MRP-S27	109 → 109.4 → 109.4.1
31	W	e8csuW1	W:77-174	MRP-S35	2 → 2.1 → 2.1.1
32	X	e8csuX1	X:347-398	DAP3	148 → 148.1 → 148.1.3
33	X	e8csuX2	X:47-346	DAP3	2004 → 2004.1 → 2004.1.1
34	Y	e8csuY1	Y:276-383	MRP-S31	3968 → 3968.1 → 3968.1.1
35	Z	e8csuZ1	Z:4-72	MRP-S33	3969 → 3969.1 → 3969.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors