PDB 8D4R
X-RAY DIFFRACTION3.80 Å6 chains12 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
1 domain
2 domains
2 domains
3 domains
2 domains
2 domains
All Domains (12)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | B | e8d4rB01 | B:519-664 | GP41 | 3567 → 3567.1 → 3567.1.1 |
| 2 | D | e8d4rD01 | D:1-112 | V-set | 11 → 11.1 → 11.1.1 |
| 3 | D | e8d4rD02 | D:113-209 | 11.1.1.0 | 11 → 11.1 → 11.1.1 |
| 4 | E | e8d4rE01 | E:2-112 | V-set | 11 → 11.1 → 11.1.1 |
| 5 | E | e8d4rE02 | E:113-210 | C1-set | 11 → 11.1 → 11.1.1 |
| 6 | G | e8d4rG01 | G:31-119,G:203-255,G:279-284,G:474-503 | GP120 | 1061 → 1061.1 → 1061.1.1 |
| 7 | G | e8d4rG02 | G:120-202 | GP120 | 6173 → 6173.1 → 6173.1.1 |
| 8 | G | e8d4rG03 | G:256-278,G:285-473 | GP120 | 1061 → 1061.1 → 1061.1.1 |
| 9 | H | e8d4rH01 | H:2-112 | V-set | 11 → 11.1 → 11.1.1 |
| 10 | H | e8d4rH02 | H:113-213 | C1-set | 11 → 11.1 → 11.1.1 |
| 11 | L | e8d4rL01 | L:5-107 | V-set | 11 → 11.1 → 11.1.1 |
| 12 | L | e8d4rL02 | L:108-209 | C1-set | 11 → 11.1 → 11.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors