PDB 8DP1
ELECTRON MICROSCOPY12 chains24 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
3 domains
2 domains
2 domains
1 domain
3 domains
2 domains
2 domains
2 domains
1 domain
2 domains
1 domain
3 domains
All Domains (24)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | B | e8dp1B1 | B:256-473 | GP120 | 259 → 259.1 → 259.1.1 |
| 2 | B | e8dp1B2 | B:120-202 | GP120 | 6173 → 6173.1 → 6173.1.1 |
| 3 | B | e8dp1B3 | B:32-119,B:203-255,B:474-504 | GP120 | 1061 → 1061.1 → 1061.1.1 |
| 4 | E | e8dp1E1 | E:1-125 | V-set | 11 → 11.1 → 11.1.1 |
| 5 | E | e8dp1E2 | E:126-225 | C1-set | 11 → 11.1 → 11.1.1 |
| 6 | F | e8dp1F1 | F:1-111 | V-set | 11 → 11.1 → 11.1.1 |
| 7 | F | e8dp1F2 | F:112-217 | C1-set | 11 → 11.1 → 11.1.1 |
| 8 | H | e8dp1H1 | H:517-547,H:569-663 | GP41 | 3567 → 3567.1 → 3567.1.1 |
| 9 | J | e8dp1J1 | J:32-119,J:203-255,J:474-504 | GP120 | 1061 → 1061.1 → 1061.1.1 |
| 10 | J | e8dp1J2 | J:256-473 | GP120 | 259 → 259.1 → 259.1.1 |
| 11 | J | e8dp1J3 | J:120-202 | GP120 | 6173 → 6173.1 → 6173.1.1 |
| 12 | M | e8dp1M1 | M:112-217 | C1-set | 11 → 11.1 → 11.1.1 |
| 13 | M | e8dp1M2 | M:1-111 | V-set | 11 → 11.1 → 11.1.1 |
| 14 | N | e8dp1N1 | N:126-225 | C1-set | 11 → 11.1 → 11.1.1 |
| 15 | N | e8dp1N2 | N:1-125 | V-set | 11 → 11.1 → 11.1.1 |
| 16 | O | e8dp1O1 | O:1-111 | V-set | 11 → 11.1 → 11.1.1 |
| 17 | O | e8dp1O2 | O:112-217 | C1-set | 11 → 11.1 → 11.1.1 |
| 18 | Q | e8dp1Q1 | Q:517-547,Q:569-663 | GP41 | 3567 → 3567.1 → 3567.1.1 |
| 19 | R | e8dp1R1 | R:126-225 | C1-set | 11 → 11.1 → 11.1.1 |
| 20 | R | e8dp1R2 | R:1-125 | V-set | 11 → 11.1 → 11.1.1 |
| 21 | S | e8dp1S1 | S:517-547,S:569-663 | GP41 | 3567 → 3567.1 → 3567.1.1 |
| 22 | W | e8dp1W1 | W:32-119,W:203-255,W:474-504 | GP120 | 1061 → 1061.1 → 1061.1.1 |
| 23 | W | e8dp1W2 | W:120-202 | GP120 | 6173 → 6173.1 → 6173.1.1 |
| 24 | W | e8dp1W3 | W:256-473 | GP120 | 259 → 259.1 → 259.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors