ECODEvolutionary Classification of Protein Domains

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PDB 8DPM

ELECTRON MICROSCOPY15 chains18 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AGlycoprotein GP1view chain

1 domain

e8dpmA1(A:33-187,A:214-233)

Chain BGlycoprotein GP2view chain

1 domain

e8dpmB1(B:503-598)

Chain CAntibody 6D6 scFvview chain

2 domains

e8dpmC1(C:1-114)e8dpmC2(C:138-243)

Chain DAntibody 9.20.1A2 Fab heavy chainview chain

1 domain

e8dpmD1(D:2-120)

Chain EAntibody 9.20.1A2 Fab light chainview chain

1 domain

e8dpmE1(E:3-112)

Chain FGlycoprotein GP1view chain

1 domain

e8dpmF1(F:33-187,F:214-233)

Chain GGlycoprotein GP2view chain

1 domain

e8dpmG1(G:503-598)

Chain HAntibody 6D6 scFvview chain

2 domains

e8dpmH1(H:138-243)e8dpmH2(H:1-114)

Chain IAntibody 9.20.1A2 Fab heavy chainview chain

1 domain

e8dpmI1(I:2-120)

Chain JAntibody 9.20.1A2 Fab light chainview chain

1 domain

e8dpmJ1(J:3-112)

Chain KGlycoprotein GP1view chain

1 domain

e8dpmK1(K:33-187,K:214-233)

Chain LGlycoprotein GP2view chain

1 domain

e8dpmL1(L:503-598)

Chain MAntibody 6D6 scFvview chain

2 domains

e8dpmM1(M:138-243)e8dpmM2(M:1-114)

Chain NAntibody 9.20.1A2 Fab heavy chainview chain

1 domain

e8dpmN1(N:2-120)

Chain OAntibody 9.20.1A2 Fab light chainview chain

1 domain

e8dpmO1(O:3-112)

All Domains (18)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8dpmA1	A:33-187,A:214-233	Filo_glycop	3401 → 3401.1 → 3401.1.1
2	B	e8dpmB1	B:503-598	Ebola-like_HR1-HR2	3782 → 3782.1 → 3782.1.1
3	C	e8dpmC1	C:1-114	V-set	11 → 11.1 → 11.1.1
4	C	e8dpmC2	C:138-243	V-set	11 → 11.1 → 11.1.1
5	D	e8dpmD1	D:2-120	V-set	11 → 11.1 → 11.1.1
6	E	e8dpmE1	E:3-112	V-set	11 → 11.1 → 11.1.1
7	F	e8dpmF1	F:33-187,F:214-233	Filo_glycop	3401 → 3401.1 → 3401.1.1
8	G	e8dpmG1	G:503-598	Ebola-like_HR1-HR2	3782 → 3782.1 → 3782.1.1
9	H	e8dpmH1	H:138-243	V-set	11 → 11.1 → 11.1.1
10	H	e8dpmH2	H:1-114	V-set	11 → 11.1 → 11.1.1
11	I	e8dpmI1	I:2-120	V-set	11 → 11.1 → 11.1.1
12	J	e8dpmJ1	J:3-112	V-set	11 → 11.1 → 11.1.1
13	K	e8dpmK1	K:33-187,K:214-233	Filo_glycop	3401 → 3401.1 → 3401.1.1
14	L	e8dpmL1	L:503-598	Ebola-like_HR1-HR2	3782 → 3782.1 → 3782.1.1
15	M	e8dpmM1	M:138-243	V-set	11 → 11.1 → 11.1.1
16	M	e8dpmM2	M:1-114	V-set	11 → 11.1 → 11.1.1
17	N	e8dpmN1	N:2-120	V-set	11 → 11.1 → 11.1.1
18	O	e8dpmO1	O:3-112	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors