ECODEvolutionary Classification of Protein Domains

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PDB 8DUA

ELECTRON MICROSCOPY12 chains15 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AEnvelope glycoprotein gp41view chain

1 domain

e8duaA1(A:570-664)

Chain BEnvelope glycoprotein gp41view chain

1 domain

e8duaB1(B:570-664)

Chain CEnvelope glycoprotein gp120view chain

2 domains

e8duaC1(C:33-117,C:212-255,C:474-505)e8duaC2(C:256-298,C:331-392,C:441-473)

Chain DITS92.02 Heavy Chainview chain

1 domain

e8duaD1(D:1-112)

Chain EITS92.02 Light Chainview chain

1 domain

e8duaE1(E:1-107)

Chain FEnvelope glycoprotein gp41view chain

1 domain

e8duaF1(F:570-664)

Chain GEnvelope glycoprotein gp120view chain

2 domains

e8duaG1(G:33-117,G:212-255,G:474-505)e8duaG2(G:256-298,G:331-392,G:441-473)

Chain HITS92.02 Heavy Chainview chain

1 domain

e8duaH1(H:1-112)

Chain IEnvelope glycoprotein gp120view chain

2 domains

e8duaI1(I:33-117,I:212-255,I:474-505)e8duaI2(I:256-298,I:331-392,I:441-473)

Chain JITS92.02 Heavy Chainview chain

1 domain

e8duaJ1(J:1-112)

Chain KITS92.02 Light Chainview chain

1 domain

e8duaK1(K:1-107)

Chain LITS92.02 Light Chainview chain

1 domain

e8duaL1(L:1-107)

All Domains (15)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8duaA1	A:570-664	GP41	3567 → 3567.1 → 3567.1.1
2	B	e8duaB1	B:570-664	GP41	3567 → 3567.1 → 3567.1.1
3	C	e8duaC1	C:33-117,C:212-255,C:474-505	GP120	1061 → 1061.1 → 1061.1.1
4	C	e8duaC2	C:256-298,C:331-392,C:441-473	GP120	259 → 259.1 → 259.1.1
5	D	e8duaD1	D:1-112	V-set	11 → 11.1 → 11.1.1
6	E	e8duaE1	E:1-107	V-set	11 → 11.1 → 11.1.1
7	F	e8duaF1	F:570-664	GP41	3567 → 3567.1 → 3567.1.1
8	G	e8duaG1	G:33-117,G:212-255,G:474-505	GP120	1061 → 1061.1 → 1061.1.1
9	G	e8duaG2	G:256-298,G:331-392,G:441-473	GP120	259 → 259.1 → 259.1.1
10	H	e8duaH1	H:1-112	V-set	11 → 11.1 → 11.1.1
11	I	e8duaI1	I:33-117,I:212-255,I:474-505	GP120	1061 → 1061.1 → 1061.1.1
12	I	e8duaI2	I:256-298,I:331-392,I:441-473	GP120	259 → 259.1 → 259.1.1
13	J	e8duaJ1	J:1-112	V-set	11 → 11.1 → 11.1.1
14	K	e8duaK1	K:1-107	V-set	11 → 11.1 → 11.1.1
15	L	e8duaL1	L:1-107	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors