ECODEvolutionary Classification of Protein Domains

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PDB 8E8S

ELECTRON MICROSCOPY6 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Capsid protein VP1view chain

1 domain

e8e8s11(1:25-301)

Chain 2Capsid protein VP2view chain

1 domain

e8e8s21(2:10-271)

Chain 3Capsid protein VP3view chain

1 domain

e8e8s31(3:1-235)

Chain 4Capsid protein VP4view chain

1 domain

e8e8s41(4:2-69)

Chain H9H2 Fab heavy chainview chain

1 domain

e8e8sH1(H:23-148)

Chain L9H2 Fab light chainview chain

1 domain

e8e8sL1(L:20-129)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	1	e8e8s11	1:25-301	Rhv	10 → 10.2 → 10.2.1
2	2	e8e8s21	2:10-271	Rhv	10 → 10.2 → 10.2.1
3	3	e8e8s31	3:1-235	Rhv	10 → 10.2 → 10.2.1
4	4	e8e8s41	4:2-69	Pico_P1A	10 → 10.2 → 10.2.1
5	H	e8e8sH1	H:23-148	V-set	11 → 11.1 → 11.1.1
6	L	e8e8sL1	L:20-129	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors