ECODEvolutionary Classification of Protein Domains

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PDB 8EUV

ELECTRON MICROSCOPY12 chains18 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AEnvelope glycoprotein gp120view chain

3 domains

e8euvA1(A:31-119,A:203-255,A:474-503)e8euvA2(A:256-473)e8euvA3(A:120-202)

Chain BEnvelope glycoprotein gp41view chain

1 domain

e8euvB1(B:512-546,B:569-663)

Chain CEnvelope glycoprotein gp120view chain

3 domains

e8euvC1(C:31-119,C:203-255,C:474-503)e8euvC2(C:120-202)e8euvC3(C:256-473)

Chain DEnvelope glycoprotein gp41view chain

1 domain

e8euvD1(D:512-546,D:569-663)

Chain EEnvelope glycoprotein gp120view chain

3 domains

e8euvE1(E:256-473)e8euvE2(E:31-119,E:203-255,E:474-503)e8euvE3(E:120-202)

Chain FEnvelope glycoprotein gp41view chain

1 domain

e8euvF1(F:512-546,F:569-663)

Chain GVRC34.01-COMBO1 FAB variable heavy chainview chain

1 domain

e8euvG1(G:1-113)

Chain HVRC34.01-COMBO1 FAB variable light chainview chain

1 domain

e8euvH1(H:1-107)

Chain IVRC34.01-COMBO1 FAB variable heavy chainview chain

1 domain

e8euvI1(I:1-113)

Chain JVRC34.01-COMBO1 FAB variable light chainview chain

1 domain

e8euvJ1(J:1-107)

Chain KVRC34.01-COMBO1 FAB variable heavy chainview chain

1 domain

e8euvK1(K:1-113)

Chain LVRC34.01-COMBO1 FAB variable light chainview chain

1 domain

e8euvL1(L:1-107)

All Domains (18)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8euvA1	A:31-119,A:203-255,A:474-503	GP120	1061 → 1061.1 → 1061.1.1
2	A	e8euvA2	A:256-473	GP120	259 → 259.1 → 259.1.1
3	A	e8euvA3	A:120-202	GP120	6173 → 6173.1 → 6173.1.1
4	B	e8euvB1	B:512-546,B:569-663	GP41	3567 → 3567.1 → 3567.1.1
5	C	e8euvC1	C:31-119,C:203-255,C:474-503	GP120	1061 → 1061.1 → 1061.1.1
6	C	e8euvC2	C:120-202	GP120	6173 → 6173.1 → 6173.1.1
7	C	e8euvC3	C:256-473	GP120	259 → 259.1 → 259.1.1
8	D	e8euvD1	D:512-546,D:569-663	GP41	3567 → 3567.1 → 3567.1.1
9	E	e8euvE1	E:256-473	GP120	259 → 259.1 → 259.1.1
10	E	e8euvE2	E:31-119,E:203-255,E:474-503	GP120	1061 → 1061.1 → 1061.1.1
11	E	e8euvE3	E:120-202	GP120	6173 → 6173.1 → 6173.1.1
12	F	e8euvF1	F:512-546,F:569-663	GP41	3567 → 3567.1 → 3567.1.1
13	G	e8euvG1	G:1-113	V-set	11 → 11.1 → 11.1.1
14	H	e8euvH1	H:1-107	V-set	11 → 11.1 → 11.1.1
15	I	e8euvI1	I:1-113	V-set	11 → 11.1 → 11.1.1
16	J	e8euvJ1	J:1-107	V-set	11 → 11.1 → 11.1.1
17	K	e8euvK1	K:1-113	V-set	11 → 11.1 → 11.1.1
18	L	e8euvL1	L:1-107	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors