ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 8FD1

X-RAY DIFFRACTION4.24 Å4 chains4 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain ARhodopsinview chain

1 domain

e8fd1A1(A:1-323)

Chain BRhodopsinview chain

1 domain

e8fd1B1(B:1-323)

Chain CNanobody Nb2view chain

1 domain

e8fd1C1(C:1-114)

Chain DNanobody Nb2view chain

1 domain

e8fd1D1(D:1-114)

All Domains (4)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8fd1A1	A:1-323	7tm_1,Rhodopsin_N	5001 → 5001.1 → 5001.1.1
2	B	e8fd1B1	B:1-323	7tm_1,Rhodopsin_N	5001 → 5001.1 → 5001.1.1
3	C	e8fd1C1	C:1-114	V-set	11 → 11.1 → 11.1.1
4	D	e8fd1D1	D:1-114	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors