ECODEvolutionary Classification of Protein Domains

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PDB 8FSJ

ELECTRON MICROSCOPY6 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AHCV E1 ectodomain, SYNZIP1 scaffold fusionview chain

1 domain

e8fsjA1(A:192-255,A:295-312)

Chain BAR4A light chainview chain

2 domains

e8fsjB1(B:2-107)e8fsjB2(B:108-211)

Chain CAR4A heavy chainview chain

2 domains

e8fsjC1(C:3-113)e8fsjC2(C:114-213)

Chain EHCV E2 ectodomain, SYNZIP2 scaffold fusionview chain

1 domain

e8fsjE01(E:436-645)

Chain HHEPC74 heavy chainview chain

2 domains

e8fsjH1(H:114-215)e8fsjH2(H:1-113)

Chain LHEPC74 light chainview chain

2 domains

e8fsjL1(L:109-213)e8fsjL2(L:1-108)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8fsjA1	A:192-255,A:295-312	HCV_env	6042 → 6042.1 → 6042.1.1
2	B	e8fsjB1	B:2-107	V-set	11 → 11.1 → 11.1.1
3	B	e8fsjB2	B:108-211	C1-set	11 → 11.1 → 11.1.1
4	C	e8fsjC1	C:3-113	V-set	11 → 11.1 → 11.1.1
5	C	e8fsjC2	C:114-213	C1-set	11 → 11.1 → 11.1.1
6	E	e8fsjE01	E:436-645	HCV_NS1	11 → 11.30 → 11.30.1
7	H	e8fsjH1	H:114-215	C1-set	11 → 11.1 → 11.1.1
8	H	e8fsjH2	H:1-113	V-set	11 → 11.1 → 11.1.1
9	L	e8fsjL1	L:109-213	C1-set	11 → 11.1 → 11.1.1
10	L	e8fsjL2	L:1-108	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors