ECODEvolutionary Classification of Protein Domains

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PDB 8FVJ

ELECTRON MICROSCOPY10 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 0Core-binding factor subunit betaview chain

1 domain

e8fvj01(0:7-135)

Chain 1Virion infectivity factorview chain

1 domain

e8fvj11(1:3-173)

Chain 2Cullin-5view chain

1 domain

e8fvj21(2:12-319)

Chain 3Elongin-Bview chain

1 domain

e8fvj31(3:1-96)

Chain 4Elongin-Cview chain

1 domain

e8fvj41(4:17-111)

Chain 5Core-binding factor subunit betaview chain

1 domain

e8fvj51(5:7-135)

Chain 6Virion infectivity factorview chain

1 domain

e8fvj61(6:3-173)

Chain 7Cullin-5view chain

1 domain

e8fvj71(7:12-319)

Chain 8Elongin-Bview chain

1 domain

e8fvj81(8:1-96)

Chain 9Elongin-Cview chain

1 domain

e8fvj91(9:17-111)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	0	e8fvj01	0:7-135	CBF_beta	517 → 517.1 → 517.1.1
2	1	e8fvj11	1:3-173	Vif	3800 → 3800.1 → 3800.1.1
3	2	e8fvj21	2:12-319	Cullin	109 → 109.4 → 109.4.1
4	3	e8fvj31	3:1-96	ubiquitin	221 → 221.1 → 221.1.1
5	4	e8fvj41	4:17-111	Skp1_POZ	226 → 226.1 → 226.1.1
6	5	e8fvj51	5:7-135	CBF_beta	517 → 517.1 → 517.1.1
7	6	e8fvj61	6:3-173	Vif	3800 → 3800.1 → 3800.1.1
8	7	e8fvj71	7:12-319	Cullin	109 → 109.4 → 109.4.1
9	8	e8fvj81	8:1-96	ubiquitin	221 → 221.1 → 221.1.1
10	9	e8fvj91	9:17-111	Skp1_POZ	226 → 226.1 → 226.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors