ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 8G4T

ELECTRON MICROSCOPY12 chains18 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain AEnvelope glycoprotein BG505 DS-SOSIP gp41view chain

1 domain

e8g4tA1(A:512-547,A:569-664)

Chain BEnvelope glycoprotein BG505 DS-SOSIP gp41view chain

1 domain

e8g4tB1(B:512-547,B:569-664)

Chain CEnvelope glycoprotein BG505 DS-SOSIP gp120view chain

3 domains

e8g4tC1(C:120-202)e8g4tC2(C:256-473)e8g4tC3(C:31-119,C:203-255,C:474-505)

Chain DFab 2C09 heavy chainview chain

1 domain

e8g4tD1(D:1-113)

Chain EFab 2C09 light chainview chain

1 domain

e8g4tE1(E:1-107)

Chain FEnvelope glycoprotein BG505 DS-SOSIP gp41view chain

1 domain

e8g4tF1(F:512-547,F:569-664)

Chain GEnvelope glycoprotein BG505 DS-SOSIP gp120view chain

3 domains

e8g4tG1(G:256-473)e8g4tG2(G:120-202)e8g4tG3(G:31-119,G:203-255,G:474-505)

Chain HFab 2C09 heavy chainview chain

1 domain

e8g4tH1(H:1-113)

Chain IEnvelope glycoprotein BG505 DS-SOSIP gp120view chain

3 domains

e8g4tI1(I:256-473)e8g4tI2(I:31-119,I:203-255,I:474-505)e8g4tI3(I:120-202)

Chain JFab 2C09 heavy chainview chain

1 domain

e8g4tJ1(J:1-113)

Chain KFab 2C09 light chainview chain

1 domain

e8g4tK1(K:1-106)

Chain LFab 2C09 light chainview chain

1 domain

e8g4tL1(L:1-106)

All Domains (18)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8g4tA1	A:512-547,A:569-664	GP41	3567 → 3567.1 → 3567.1.1
2	B	e8g4tB1	B:512-547,B:569-664	GP41	3567 → 3567.1 → 3567.1.1
3	C	e8g4tC1	C:120-202	GP120	6173 → 6173.1 → 6173.1.1
4	C	e8g4tC2	C:256-473	GP120	259 → 259.1 → 259.1.1
5	C	e8g4tC3	C:31-119,C:203-255,C:474-505	GP120	1061 → 1061.1 → 1061.1.1
6	D	e8g4tD1	D:1-113	V-set	11 → 11.1 → 11.1.1
7	E	e8g4tE1	E:1-107	V-set	11 → 11.1 → 11.1.1
8	F	e8g4tF1	F:512-547,F:569-664	GP41	3567 → 3567.1 → 3567.1.1
9	G	e8g4tG1	G:256-473	GP120	259 → 259.1 → 259.1.1
10	G	e8g4tG2	G:120-202	GP120	6173 → 6173.1 → 6173.1.1
11	G	e8g4tG3	G:31-119,G:203-255,G:474-505	GP120	1061 → 1061.1 → 1061.1.1
12	H	e8g4tH1	H:1-113	V-set	11 → 11.1 → 11.1.1
13	I	e8g4tI1	I:256-473	GP120	259 → 259.1 → 259.1.1
14	I	e8g4tI2	I:31-119,I:203-255,I:474-505	GP120	1061 → 1061.1 → 1061.1.1
15	I	e8g4tI3	I:120-202	GP120	6173 → 6173.1 → 6173.1.1
16	J	e8g4tJ1	J:1-113	V-set	11 → 11.1 → 11.1.1
17	K	e8g4tK1	K:1-106	V-set	11 → 11.1 → 11.1.1
18	L	e8g4tL1	L:1-106	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors