ECODEvolutionary Classification of Protein Domains

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PDB 8GRQ

ELECTRON MICROSCOPY13 chains11 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AHistone H3view chain

1 domain

e8grqA1(A:37-134)

Chain BHistone H4view chain

1 domain

e8grqB1(B:22-101)

Chain CHistone H2A type 1-Hview chain

1 domain

e8grqC1(C:10-119)

Chain DH2Bview chain

1 domain

e8grqD1(D:31-124)

Chain EHistone H3view chain

1 domain

e8grqE1(E:38-134)

Chain FHistone H4view chain

1 domain

e8grqF1(F:23-101)

Chain GHistone H2A type 1-Hview chain

1 domain

e8grqG1(G:10-118)

Chain HH2Bview chain

1 domain

e8grqH1(H:31-124)

Chain KBreast cancer type 1 susceptibility proteinview chain

1 domain

e8grqK1(K:6-97)

Chain MBRCA1-associated RING domain protein 1view chain

1 domain

e8grqM1(M:34-117)

Chain NUbiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), isoform CRA_aview chain

1 domain

e8grqN1(N:1-147)

All Domains (11)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8grqA1	A:37-134	Histone	148 → 148.1 → 148.1.1
2	B	e8grqB1	B:22-101	CENP-T_C	148 → 148.1 → 148.1.1
3	C	e8grqC1	C:10-119	Histone_H2A_C	148 → 148.1 → 148.1.1
4	D	e8grqD1	D:31-124	Histone	148 → 148.1 → 148.1.1
5	E	e8grqE1	E:38-134	Histone	148 → 148.1 → 148.1.1
6	F	e8grqF1	F:23-101	CENP-T_C	148 → 148.1 → 148.1.1
7	G	e8grqG1	G:10-118	Histone_H2A_C	148 → 148.1 → 148.1.1
8	H	e8grqH1	H:31-124	Histone	148 → 148.1 → 148.1.1
9	K	e8grqK1	K:6-97	zf-C3HC4	376 → 376.1 → 376.1.1
10	M	e8grqM1	M:34-117	zf-RING_6	376 → 376.1 → 376.1.1
11	N	e8grqN1	N:1-147	UQ_con	216 → 216.1 → 216.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors