PDB 8HIM
ELECTRON MICROSCOPY13 chains23 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
6 domains
6 domains
2 domains
2 domains
1 domain
1 domain
2 domains
1 domain
1 domain
1 domain
All Domains (23)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8himA01 | A:56-312,A:371-373,A:534-536,A:559-562,A:639-640,A:648,A:735-738 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 2 | A | e8himA02 | A:313-350,A:405-488 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 3 | A | e8himA03 | A:351-370,A:374-404 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 4 | A | e8himA04 | A:489-533,A:537-558,A:563-618 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 5 | A | e8himA05 | A:619-638,A:641-647,A:649-734,A:739-810 | 4958.1.1.0 | 4958 → 4958.1 → 4958.1.1 |
| 6 | A | e8himA06 | A:1872-1940 | DUF3223 | 3556 → 3556.1 → 3556.1.1 |
| 7 | B | e8himB1 | B:796-904 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 8 | B | e8himB2 | B:15-134,B:162-219,B:395-531 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 9 | B | e8himB3 | B:758-795,B:905-1048 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 10 | B | e8himB4 | B:620-757 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 11 | B | e8himB5 | B:218-394 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 12 | B | e8himB6 | B:532-620 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 13 | C | e8himC1 | C:1-47,C:95-96,C:184-196,C:228-293 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 14 | C | e8himC2 | C:48-94,C:97-183 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 15 | E | e8himE1 | E:159-230 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 16 | E | e8himE2 | E:22-158 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 17 | F | e8himF1 | F:58-137 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 18 | H | e8himH1 | H:5-145 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 19 | I | e8himI1 | I:50-114 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 20 | I | e8himI2 | I:3-49 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 21 | J | e8himJ1 | J:1-63 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 22 | K | e8himK1 | K:6-113 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 23 | L | e8himL1 | L:7-51 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors