ECODEvolutionary Classification of Protein Domains

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PDB 8J7A

ELECTRON MICROSCOPY16 chains18 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Chlorophyll a-b binding protein 6, chloroplasticview chain

1 domain

e8j7a11(1:47-113,1:141-239)

Chain 2Photosystem I chlorophyll a/b-binding protein 2, chloroplasticview chain

1 domain

e8j7a21(2:50-250)

Chain 3Photosystem I chlorophyll a/b-binding protein 3-1, chloroplasticview chain

1 domain

e8j7a31(3:53-269)

Chain 4Chlorophyll a-b binding protein 4, chloroplasticview chain

1 domain

e8j7a41(4:54-249)

Chain APhotosystem I P700 chlorophyll a apoprotein A1view chain

2 domains

e8j7aA1(A:41-411)e8j7aA2(A:412-749)

Chain BPhotosystem I P700 chlorophyll a apoprotein A2view chain

2 domains

e8j7aB1(B:3-404)e8j7aB2(B:405-734)

Chain CPhotosystem I iron-sulfur centerview chain

1 domain

e8j7aC1(C:2-81)

Chain DPhotosystem I reaction center subunit II-2, chloroplasticview chain

1 domain

e8j7aD1(D:62-204)

Chain EPhotosystem I reaction center subunit IV A, chloroplasticview chain

1 domain

e8j7aE1(E:78-141)

Chain FPhotosystem I reaction center subunit III, chloroplasticview chain

1 domain

e8j7aF1(F:70-218)

Chain GPhotosystem I reaction center subunit V, chloroplasticview chain

1 domain

e8j7aG1(G:62-152)

Chain HPhotosystem I reaction center subunit VI-2, chloroplasticview chain

1 domain

e8j7aH1(H:56-141)

Chain IPhotosystem I reaction center subunit VIIIview chain

1 domain

e8j7aI1(I:5-35)

Chain JPhotosystem I reaction center subunit IXview chain

1 domain

e8j7aJ1(J:1-41)

Chain KPhotosystem I reaction center subunit psaK, chloroplasticview chain

1 domain

e8j7aK1(K:47-70,K:96-127)

Chain LPhotosystem I reaction center subunit XI, chloroplasticview chain

1 domain

e8j7aL1(L:59-217)

All Domains (18)

#	Chain	Domain ID	Range	Family	Classification
1	1	e8j7a11	1:47-113,1:141-239	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
2	2	e8j7a21	2:50-250	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
3	3	e8j7a31	3:53-269	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
4	4	e8j7a41	4:54-249	Chloroa_b-bind	5077 → 5077.1 → 5077.1.1
5	A	e8j7aA1	A:41-411	PsaA_PsaB	5075 → 5075.1 → 5075.1.1
6	A	e8j7aA2	A:412-749	PsaA_PsaB	5037 → 5037.1 → 5037.1.1
7	B	e8j7aB1	B:3-404	PsaA_PsaB	5075 → 5075.1 → 5075.1.1
8	B	e8j7aB2	B:405-734	PsaA_PsaB	5037 → 5037.1 → 5037.1.1
9	C	e8j7aC1	C:2-81	Fer4, Fer4_21	205 → 205.1 → 205.1.1
10	D	e8j7aD1	D:62-204	PsaD	834 → 834.1 → 834.1.1
11	E	e8j7aE1	E:78-141	PSI_PsaE	4 → 4.1 → 4.1.1
12	F	e8j7aF1	F:70-218	PSI_PsaF	5019 → 5019.1 → 5019.1.1
13	G	e8j7aG1	G:62-152	PSI_PSAK	5063 → 5063.1 → 5063.1.1
14	H	e8j7aH1	H:56-141	PSI_PsaH	6037 → 6037.1 → 6037.1.1
15	I	e8j7aI1	I:5-35	PSI_8	5020 → 5020.1 → 5020.1.1
16	J	e8j7aJ1	J:1-41	PSI_PsaJ	5021 → 5021.1 → 5021.1.1
17	K	e8j7aK1	K:47-70,K:96-127	PSI_PSAK	5063 → 5063.1 → 5063.1.1
18	L	e8j7aL1	L:59-217	PsaL	5064 → 5064.1 → 5064.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors