ECODEvolutionary Classification of Protein Domains

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PDB 8PKJ

ELECTRON MICROSCOPY10 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AHistone H3 (Fragment)view chain

1 domain

e8pkjA1(A:44-136)

Chain BHistone H4view chain

1 domain

e8pkjB1(B:24-102)

Chain CHistone H2Aview chain

1 domain

e8pkjC1(C:14-119)

Chain DHistone H2Bview chain

1 domain

e8pkjD1(D:27-126)

Chain EHistone H3 (Fragment)view chain

1 domain

e8pkjE1(E:44-136)

Chain FHistone H4view chain

1 domain

e8pkjF1(F:24-102)

Chain GHistone H2Aview chain

1 domain

e8pkjG1(G:14-119)

Chain HHistone H2Bview chain

1 domain

e8pkjH1(H:27-126)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8pkjA1	A:44-136	Histone	148 → 148.1 → 148.1.1
2	B	e8pkjB1	B:24-102	148.1.1.0	148 → 148.1 → 148.1.1
3	C	e8pkjC1	C:14-119	Histone,Histone_H2A_C	148 → 148.1 → 148.1.1
4	D	e8pkjD1	D:27-126	Histone	148 → 148.1 → 148.1.1
5	E	e8pkjE1	E:44-136	Histone	148 → 148.1 → 148.1.1
6	F	e8pkjF1	F:24-102	148.1.1.0	148 → 148.1 → 148.1.1
7	G	e8pkjG1	G:14-119	Histone,Histone_H2A_C	148 → 148.1 → 148.1.1
8	H	e8pkjH1	H:27-126	Histone	148 → 148.1 → 148.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors