ECODEvolutionary Classification of Protein Domains

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PDB 8PNF

5 chains4 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Capsid protein VP1view chain

1 domain

e8pnf101(1:7-289)

Chain 2Capsid protein VP2view chain

1 domain

e8pnf21(2:1-256)

Chain 3Capsid protein VP3view chain

1 domain

e8pnf31(3:1-236)

Chain 4Capsid protein VP4view chain

1 domain

e8pnf401(4:23-69)

All Domains (4)

#	Chain	Domain ID	Range	Family	Classification
1	1	e8pnf101	1:7-289	Rhv	10 → 10.2 → 10.2.1
2	2	e8pnf21	2:1-256	Rhv	10 → 10.2 → 10.2.1
3	3	e8pnf31	3:1-236	Rhv, Calici_coat	10 → 10.2 → 10.2.1
4	4	e8pnf401	4:23-69	Pico_P1A	10 → 10.2 → 10.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors