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PDB 8RDV

ELECTRON MICROSCOPY56 chains59 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain A4Small ribosomal subunit protein uS2view chain
1 domain
Chain aALarge ribosomal subunit protein bL32view chain
1 domain
Chain AfLarge ribosomal subunit protein uL3view chain
1 domain
Chain BaLarge ribosomal subunit protein bL34view chain
1 domain
Chain bkLarge ribosomal subunit protein bL33view chain
1 domain
Chain BQSmall ribosomal subunit protein uS8view chain
2 domains
Chain C1Large ribosomal subunit protein bL9view chain
2 domains
Chain ClLarge ribosomal subunit protein uL2view chain
2 domains
Chain CTSmall ribosomal subunit protein uS3view chain
2 domains
Chain dhLarge ribosomal subunit protein bL35view chain
1 domain
Chain DmSmall ribosomal subunit protein uS4view chain
1 domain
Chain E5Small ribosomal subunit protein uS5view chain
2 domains
Chain E9Large ribosomal subunit protein uL4view chain
1 domain
Chain epLarge ribosomal subunit protein bL36view chain
1 domain
Chain FSmall ribosomal subunit protein uS9view chain
1 domain
Chain F7Large ribosomal subunit protein uL5view chain
1 domain
Chain FGSmall ribosomal subunit protein bS6view chain
1 domain
Chain fJLarge ribosomal subunit protein bL31Bview chain
1 domain
Chain GRLarge ribosomal subunit protein uL6view chain
2 domains
Chain GSSmall ribosomal subunit protein uS7view chain
1 domain
Chain HKSmall ribosomal subunit protein uS14view chain
1 domain
Chain IXLarge ribosomal subunit protein uL13view chain
1 domain
Chain JeLarge ribosomal subunit protein uL14view chain
1 domain
Chain JYSmall ribosomal subunit protein uS10view chain
1 domain
Chain KdLarge ribosomal subunit protein uL15view chain
1 domain
Chain KUSmall ribosomal subunit protein uS11view chain
1 domain
Chain L6Small ribosomal subunit protein uS12view chain
1 domain
Chain LgLarge ribosomal subunit protein uL16view chain
1 domain
Chain MBLarge ribosomal subunit protein bL17view chain
1 domain
Chain MMSmall ribosomal subunit protein uS13view chain
1 domain
Chain NcLarge ribosomal subunit protein uL18view chain
1 domain
Chain NVSmall ribosomal subunit protein bS21view chain
1 domain
Chain OiLarge ribosomal subunit protein bL19view chain
1 domain
Chain OLSmall ribosomal subunit protein uS15view chain
1 domain
Chain PjSmall ribosomal subunit protein bS16view chain
1 domain
Chain POLarge ribosomal subunit protein bL20view chain
1 domain
Chain QbLarge ribosomal subunit protein bL21view chain
1 domain
Chain QZSmall ribosomal subunit protein uS17view chain
1 domain
Chain R3Small ribosomal subunit protein bS18view chain
1 domain
Chain RFLarge ribosomal subunit protein uL22view chain
1 domain
Chain SnLarge ribosomal subunit protein uL23view chain
1 domain
Chain SPSmall ribosomal subunit protein uS19view chain
1 domain
Chain TILarge ribosomal subunit protein uL24view chain
1 domain
Chain ToSmall ribosomal subunit protein bS20view chain
1 domain
Chain UCLarge ribosomal subunit protein bL25view chain
2 domains
Chain VHLarge ribosomal subunit protein bL27view chain
1 domain
Chain WDLarge ribosomal subunit protein bL28view chain
1 domain
Chain XELarge ribosomal subunit protein uL29view chain
1 domain
Chain YWLarge ribosomal subunit protein uL30view chain
1 domain

All Domains (59)

#ChainDomain IDRangeFamilyClassification
1A4e8rdvA41A4:1-245Ribosomal_S22007 → 2007.6 → 2007.6.1
2aAe8rdvaA1aA:1-60375.1.1.0375 → 375.1 → 375.1.1
3Afe8rdvAf1Af:1-2121.1.7.01 → 1.1 → 1.1.7
4Bae8rdvBa1Ba:1-443074.1.1.03074 → 3074.1 → 3074.1.1
5bke8rdvbk1bk:1-51375.1.1.0375 → 375.1 → 375.1.1
6BQe8rdvBQ1BQ:1-69Ribosomal_S8320 → 320.2 → 320.2.1
7BQe8rdvBQ2BQ:70-132320.2.1.0320 → 320.2 → 320.2.1
8C1e8rdvC11C1:1-52Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
9C1e8rdvC12C1:53-163Ribosomal_L9_C523 → 523.1 → 523.1.1
10Cle8rdvCl1Cl:1-126Ribosomal_L22 → 2.1 → 2.1.1
11Cle8rdvCl2Cl:127-273Ribosomal_L2_C4 → 4.1 → 4.1.1
12CTe8rdvCT1CT:1-107KH_2327 → 327.11 → 327.11.1
13CTe8rdvCT2CT:108-208Ribosomal_S3_C230 → 230.2 → 230.2.1
14dhe8rdvdh1dh:1-654281.1.1.04281 → 4281.1 → 4281.1.1
15Dme8rdvDm1Dm:1-213221.1.2.0221 → 221.1 → 221.1.2
16E5e8rdvE51E5:1-82Ribosomal_S53274 → 3274.1 → 3274.1.1
17E5e8rdvE52E5:83-171212.1.1.0212 → 212.1 → 212.1.1
18E9e8rdvE91E9:1-2007559.1.1.07559 → 7559.1 → 7559.1.1
19epe8rdvep1ep:1-38919.1.1.0919 → 919.1 → 919.1.1
20Fe8rdvF1F:1-128212.1.1.0212 → 212.1 → 212.1.1
21F7e8rdvF71F7:1-178882.1.1.0882 → 882.1 → 882.1.1
22FGe8rdvFG1FG:1-124Ribosomal_S6304 → 304.12 → 304.12.1
23fJe8rdvfJ1fJ:1-91Ribosomal_L314987 → 4987.1 → 4987.1.1
24GRe8rdvGR1GR:1-83Ribosomal_L6318 → 318.1 → 318.1.1
25GRe8rdvGR2GR:84-177318.1.1.0318 → 318.1 → 318.1.1
26GSe8rdvGS1GS:1-157167.1.1.0167 → 167.1 → 167.1.1
27He8rdvH1H:1-205GTP_EFTU2004 → 2004.1 → 2004.1.1
28He8rdvH2H:206-303GTP_EFTU_D21 → 1.1 → 1.1.7
29He8rdvH3H:304-393GTP_EFTU_D31 → 1.1 → 1.1.8
30HKe8rdvHK1HK:1-101377.1.1.0377 → 377.1 → 377.1.1
31IXe8rdvIX1IX:1-1422490.2.1.02490 → 2490.2 → 2490.2.1
32Jee8rdvJe1Je:1-1223174.1.1.03174 → 3174.1 → 3174.1.1
33JYe8rdvJY1JY:1-103304.44.1.0304 → 304.44 → 304.44.1
34Kde8rdvKd1Kd:1-1462490.3.1.02490 → 2490.3 → 2490.3.1
35KUe8rdvKU1KU:1-1292484.1.1.02484 → 2484.1 → 2484.1.1
36L6e8rdvL61L6:1-1242.1.1.02 → 2.1 → 2.1.1
37Lge8rdvLg1Lg:1-137325.1.5.0325 → 325.1 → 325.1.5
38MBe8rdvMB1MB:1-119218.3.1.0218 → 218.3 → 218.3.1
39MMe8rdvMM1MM:1-118102.2.1.0102 → 102.2 → 102.2.1
40Nce8rdvNc1Nc:1-1162484.1.1.02484 → 2484.1 → 2484.1.1
41NVe8rdvNV1NV:1-713666.1.1.03666 → 3666.1 → 3666.1.1
42Oie8rdvOi1Oi:1-1304.1.1.04 → 4.1 → 4.1.1
43OLe8rdvOL1OL:1-88616.1.1.0616 → 616.1 → 616.1.1
44Pje8rdvPj1Pj:1-89837.1.1.0837 → 837.1 → 837.1.1
45POe8rdvPO1PO:1-118143.2.1.0143 → 143.2 → 143.2.1
46Qbe8rdvQb1Qb:1-1034186.1.1.04186 → 4186.1 → 4186.1.1
47QZe8rdvQZ1QZ:1-912.1.1.02 → 2.1 → 2.1.1
48R3e8rdvR31R3:1-76101.1.1.0101 → 101.1 → 101.1.1
49RFe8rdvRF1RF:1-109218.2.1.0218 → 218.2 → 218.2.1
50Sne8rdvSn1Sn:1-110Ribosomal_L23304 → 304.109 → 304.109.1
51SPe8rdvSP1SP:1-91838.1.1.0838 → 838.1 → 838.1.1
52TIe8rdvTI1TI:1-1054.1.1.04 → 4.1 → 4.1.1
53Toe8rdvTo1To:1-88604.9.1.0604 → 604.9 → 604.9.1
54UCe8rdvUC1UC:1-102Ribosomal_L25p239 → 239.1 → 239.1.1
55UCe8rdvUC2UC:103-215Ribosomal_TL5_C240 → 240.1 → 240.1.1
56VHe8rdvVH1VH:1-85325.1.8.0325 → 325.1 → 325.1.8
57WDe8rdvWD1WD:1-784232.1.1.04232 → 4232.1 → 4232.1.1
58XEe8rdvXE1XE:1-65192.4.1.0192 → 192.4 → 192.4.1
59YWe8rdvYW1YW:1-59887.1.1.0887 → 887.1 → 887.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors