ECODEvolutionary Classification of Protein Domains

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PDB 8RDX

X-RAY DIFFRACTION3.67 Å12 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AProtein farnesyltransferase/geranylgeranyltransferase type-1 subunit alphaview chain

1 domain

e8rdxA01(A:80-358)

Chain BGeranylgeranyl transferase type-1 subunit betaview chain

1 domain

e8rdxB01(B:18-354)

Chain CProtein farnesyltransferase/geranylgeranyltransferase type-1 subunit alphaview chain

1 domain

e8rdxC1(C:26-304)

Chain DGeranylgeranyl transferase type-1 subunit betaview chain

1 domain

e8rdxD1(D:1-337)

Chain EProtein farnesyltransferase/geranylgeranyltransferase type-1 subunit alphaview chain

1 domain

e8rdxE1(E:26-304)

Chain FGeranylgeranyl transferase type-1 subunit betaview chain

1 domain

e8rdxF1(F:1-337)

Chain GProtein farnesyltransferase/geranylgeranyltransferase type-1 subunit alphaview chain

1 domain

e8rdxG1(G:26-304)

Chain HGeranylgeranyl transferase type-1 subunit betaview chain

1 domain

e8rdxH1(H:1-337)

Chain IProtein farnesyltransferase/geranylgeranyltransferase type-1 subunit alphaview chain

1 domain

e8rdxI1(I:26-304)

Chain JGeranylgeranyl transferase type-1 subunit betaview chain

1 domain

e8rdxJ1(J:1-337)

Chain KProtein farnesyltransferase/geranylgeranyltransferase type-1 subunit alphaview chain

1 domain

e8rdxK1(K:26-304)

Chain LGeranylgeranyl transferase type-1 subunit betaview chain

1 domain

e8rdxL1(L:1-337)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8rdxA01	A:80-358	PPTA	109 → 109.4 → 109.4.1
2	B	e8rdxB01	B:18-354	Prenyltrans	109 → 109.2 → 109.2.1
3	C	e8rdxC1	C:26-304	PPTA	109 → 109.4 → 109.4.1
4	D	e8rdxD1	D:1-337	Prenyltrans	109 → 109.2 → 109.2.1
5	E	e8rdxE1	E:26-304	PPTA	109 → 109.4 → 109.4.1
6	F	e8rdxF1	F:1-337	Prenyltrans	109 → 109.2 → 109.2.1
7	G	e8rdxG1	G:26-304	PPTA	109 → 109.4 → 109.4.1
8	H	e8rdxH1	H:1-337	Prenyltrans	109 → 109.2 → 109.2.1
9	I	e8rdxI1	I:26-304	PPTA	109 → 109.4 → 109.4.1
10	J	e8rdxJ1	J:1-337	Prenyltrans	109 → 109.2 → 109.2.1
11	K	e8rdxK1	K:26-304	PPTA	109 → 109.4 → 109.4.1
12	L	e8rdxL1	L:1-337	Prenyltrans	109 → 109.2 → 109.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors