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PDB 8RO2

40 chains46 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain aSmall nuclear ribonucleoprotein Sm D3view chain
1 domain
Chain bSmall nuclear ribonucleoprotein-associated proteins B and B'view chain
1 domain
Chain cSmall nuclear ribonucleoprotein Sm D1view chain
1 domain
Chain C116 kDa U5 small nuclear ribonucleoprotein componentview chain
5 domains
Chain dSmall nuclear ribonucleoprotein Sm D2view chain
1 domain
Chain DPre-mRNA-splicing factor ISY1 homologview chain
1 domain
Chain eSmall nuclear ribonucleoprotein Eview chain
1 domain
Chain EU5 small nuclear ribonucleoprotein 40 kDa proteinview chain
1 domain
Chain fSmall nuclear ribonucleoprotein Fview chain
1 domain
Chain gSmall nuclear ribonucleoprotein Gview chain
1 domain
Chain IPre-mRNA-splicing factor SYF1view chain
1 domain
Chain JCrooked neck-like protein 1view chain
1 domain
Chain LCell division cycle 5-like proteinview chain
2 domains
Chain L1CWF19-like protein 1view chain
1 domain
Chain NProtein BUD31 homologview chain
1 domain
Chain OPre-mRNA-splicing factor RBM22view chain
3 domains
Chain qPre-mRNA-processing factor 19view chain
1 domain
Chain rPre-mRNA-processing factor 19view chain
1 domain
Chain sPre-mRNA-processing factor 19view chain
1 domain
Chain SPeptidyl-prolyl cis-trans isomerase-like 1view chain
1 domain
Chain tPre-mRNA-processing factor 19view chain
1 domain
Chain TPleiotropic regulator 1view chain
1 domain
Chain WPre-mRNA-processing factor 17view chain
1 domain

All Domains (46)

#ChainDomain IDRangeFamilyClassification
1ae8ro2a1a:4-75LSM4 → 4.1 → 4.1.1
2Ae8ro2A1A:26-810PRO8NT,PROCN1038 → 1038.1 → 1038.1.1
3Ae8ro2A2A:811-1182RRM_4304 → 304.48 → 304.48.1
4Ae8ro2A3A:1183-1502U6-snRNA_bdg,U5_2-snRNA_bdg4967 → 4967.1 → 4967.1.1
5Ae8ro2A4A:1755-2006PRP8_domainIV2484 → 2484.1 → 2484.1.1
6Ae8ro2A5A:1503-1754U6-snRNA_bdg2008 → 2008.1 → 2008.1.1
7Ae8ro2A6A:2067-2314JAB,PROCT2492 → 2492.1 → 2492.1.1
8be8ro2b1b:7-95LSM4 → 4.1 → 4.1.1
9ce8ro2c1c:2-81LSM4 → 4.1 → 4.1.1
10Ce8ro2C1C:829-957EFG_C304 → 304.24 → 304.24.1
11Ce8ro2C2C:581-659EFG_III304 → 304.24 → 304.24.1
12Ce8ro2C3C:660-828EFG_IV212 → 212.1 → 212.1.1
13Ce8ro2C4C:114-439GTP_EFTU2004 → 2004.1 → 2004.1.1
14Ce8ro2C5C:440-580GTP_EFTU_D21 → 1.1 → 1.1.7
15de8ro2d1d:26-73,d:93-118LSM4 → 4.1 → 4.1.1
16De8ro2D1D:39-94Isy1192 → 192.13 → 192.13.1
17DXe8ro2DX1DX:568-698HA2_C4156 → 4156.1 → 4156.1.1
18DXe8ro2DX2DX:114-315DEAD2004 → 2004.1 → 2004.1.1
19DXe8ro2DX3DX:498-567HA2_N101 → 101.1 → 101.1.2
20DXe8ro2DX4DX:316-497Helicase_C2004 → 2004.1 → 2004.1.1
21DXe8ro2DX5DX:699-776OB_NTP_bind2 → 2.1 → 2.1.1
22ee8ro2e1e:18-92LSM4 → 4.1 → 4.1.1
23Ee8ro2E1E:62-355WD40, Beta-prop_NOL10_N5 → 5.1 → 5.1.4
24fe8ro2f1f:7-81LSM4 → 4.1 → 4.1.1
25ge8ro2g1g:4-76LSM4 → 4.1 → 4.1.1
26Ie8ro2I1I:33-738TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N109 → 109.4 → 109.4.1
27Je8ro2J1J:214-802HAT, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_C, PRP6_TPR109 → 109.4 → 109.4.1
28Le8ro2L1L:8-64Myb_DNA-binding101 → 101.1 → 101.1.1
29Le8ro2L2L:62-110Myb_DNA-binding101 → 101.1 → 101.1.1
30L1e8ro2L101L1:1-261246.2.1.0246 → 246.2 → 246.2.1
31Ne8ro2N1N:3-144BUD313952 → 3952.1 → 3952.1.1
32Oe8ro2O1O:227-308RRM_1304 → 304.9 → 304.9.1
33Oe8ro2O2O:19-89STL11_N376 → 376.1 → 376.1.3
34Oe8ro2O3O:90-218zf-CCCH_RBM22906 → 906.1 → 906.1.1
35qe8ro2q1q:68-134,q:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
36Qe8ro2Q1Q:19-415Aquarius_N_1st109 → 109.4 → 109.4.1
37Qe8ro2Q2Q:1135-1333AAA_122004 → 2004.1 → 2004.1.1
38Qe8ro2Q3Q:416-492,Q:660-706,Q:795-1134ResIII, AAA_112004 → 2004.1 → 2004.1.1
39Qe8ro2Q4Q:493-659Aquarius_N_2nd1 → 1.1 → 1.1.7
40Qe8ro2Q5Q:707-753,Q:773-794Aquarius_N_3rd3940 → 3940.1 → 3940.1.1
41re8ro2r1r:68-134,r:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
42se8ro2s1s:68-134,s:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
43Se8ro2S1S:3-166Pro_isomerase75 → 75.1 → 75.1.1
44te8ro2t1t:68-134,t:195-504WD40, Prp19, WD40_Prp195 → 5.1 → 5.1.4
45Te8ro2T1T:184-496WD405 → 5.1 → 5.1.4
46We8ro2W1W:273-579WD405 → 5.1 → 5.1.4

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors