ECODEvolutionary Classification of Protein Domains

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PDB 8RT1

9 chains9 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AOuter capsid protein VP5view chain

1 domain

e8rt1A1(A:1-39,A:68-70,A:99-444)

Chain BOuter capsid protein VP5view chain

1 domain

e8rt1B1(B:1-39,B:68-70,B:99-444)

Chain COuter capsid protein VP5view chain

1 domain

e8rt1C1(C:1-39,C:68-70,C:99-444)

Chain DOuter capsid protein VP5view chain

1 domain

e8rt1D1(D:1-39,D:68-70,D:99-444)

Chain EOuter capsid protein VP5view chain

1 domain

e8rt1E1(E:1-39,E:68-70,E:99-444)

Chain FOuter capsid protein VP5view chain

1 domain

e8rt1F1(F:1-39,F:68-70,F:99-444)

Chain GOuter capsid protein VP5view chain

1 domain

e8rt1G1(G:1-39,G:68-70,G:99-444)

Chain HOuter capsid protein VP5view chain

1 domain

e8rt1H1(H:1-39,H:68-70,H:99-444)

Chain IOuter capsid protein VP5view chain

1 domain

e8rt1I1(I:1-39,I:68-70,I:99-444)

All Domains (9)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8rt1A1	A:1-39,A:68-70,A:99-444	Orbi_VP5	3733 → 3733.1 → 3733.1.1
2	B	e8rt1B1	B:1-39,B:68-70,B:99-444	Orbi_VP5	3733 → 3733.1 → 3733.1.1
3	C	e8rt1C1	C:1-39,C:68-70,C:99-444	Orbi_VP5	3733 → 3733.1 → 3733.1.1
4	D	e8rt1D1	D:1-39,D:68-70,D:99-444	Orbi_VP5	3733 → 3733.1 → 3733.1.1
5	E	e8rt1E1	E:1-39,E:68-70,E:99-444	Orbi_VP5	3733 → 3733.1 → 3733.1.1
6	F	e8rt1F1	F:1-39,F:68-70,F:99-444	Orbi_VP5	3733 → 3733.1 → 3733.1.1
7	G	e8rt1G1	G:1-39,G:68-70,G:99-444	Orbi_VP5	3733 → 3733.1 → 3733.1.1
8	H	e8rt1H1	H:1-39,H:68-70,H:99-444	Orbi_VP5	3733 → 3733.1 → 3733.1.1
9	I	e8rt1I1	I:1-39,I:68-70,I:99-444	Orbi_VP5	3733 → 3733.1 → 3733.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors