ECODEvolutionary Classification of Protein Domains

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PDB 8RTD

34 chains20 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain aTrwE proteinview chain

1 domain

e8rtda1(a:179-389)

Chain ATrwJ proteinview chain

1 domain

e8rtdA1(A:32-229)

Chain bTrwG proteinview chain

1 domain

e8rtdb1(b:95-231)

Chain BTrwJ proteinview chain

1 domain

e8rtdB1(B:32-229)

Chain cTrwG proteinview chain

1 domain

e8rtdc1(c:95-231)

Chain CTrwJ proteinview chain

1 domain

e8rtdC1(C:32-229)

Chain dTrwG proteinview chain

1 domain

e8rtdd1(d:95-231)

Chain DTrwG proteinview chain

1 domain

e8rtdD1(D:95-231)

Chain eTrwE proteinview chain

1 domain

e8rtde1(e:179-389)

Chain ETrwJ proteinview chain

1 domain

e8rtdE1(E:32-229)

Chain FTrwG proteinview chain

1 domain

e8rtdF1(F:95-231)

Chain GTrwG proteinview chain

1 domain

e8rtdG1(G:95-231)

Chain iTrwG proteinview chain

1 domain

e8rtdi1(i:95-231)

Chain KTrwJ proteinview chain

1 domain

e8rtdK1(K:32-229)

Chain QTrwG proteinview chain

1 domain

e8rtdQ1(Q:95-231)

Chain STrwG proteinview chain

1 domain

e8rtdS1(S:95-231)

Chain UTrwG proteinview chain

1 domain

e8rtdU1(U:95-231)

Chain XTrwG proteinview chain

1 domain

e8rtdX1(X:95-231)

Chain YTrwG proteinview chain

1 domain

e8rtdY1(Y:95-231)

Chain ZTrwE proteinview chain

1 domain

e8rtdZ1(Z:179-389)

All Domains (20)

#	Chain	Domain ID	Range	Family	Classification
1	a	e8rtda1	a:179-389	TrbI	517 → 517.2 → 517.2.1
2	A	e8rtdA1	A:32-229	T4SS	632 → 632.4 → 632.4.1
3	b	e8rtdb1	b:95-231	VirB8	243 → 243.1 → 243.1.1
4	B	e8rtdB1	B:32-229	T4SS	632 → 632.4 → 632.4.1
5	c	e8rtdc1	c:95-231	VirB8	243 → 243.1 → 243.1.1
6	C	e8rtdC1	C:32-229	T4SS	632 → 632.4 → 632.4.1
7	d	e8rtdd1	d:95-231	VirB8	243 → 243.1 → 243.1.1
8	D	e8rtdD1	D:95-231	VirB8	243 → 243.1 → 243.1.1
9	e	e8rtde1	e:179-389	TrbI	517 → 517.2 → 517.2.1
10	E	e8rtdE1	E:32-229	T4SS	632 → 632.4 → 632.4.1
11	F	e8rtdF1	F:95-231	VirB8	243 → 243.1 → 243.1.1
12	G	e8rtdG1	G:95-231	VirB8	243 → 243.1 → 243.1.1
13	i	e8rtdi1	i:95-231	VirB8	243 → 243.1 → 243.1.1
14	K	e8rtdK1	K:32-229	T4SS	632 → 632.4 → 632.4.1
15	Q	e8rtdQ1	Q:95-231	VirB8	243 → 243.1 → 243.1.1
16	S	e8rtdS1	S:95-231	VirB8	243 → 243.1 → 243.1.1
17	U	e8rtdU1	U:95-231	VirB8	243 → 243.1 → 243.1.1
18	X	e8rtdX1	X:95-231	VirB8	243 → 243.1 → 243.1.1
19	Y	e8rtdY1	Y:95-231	VirB8	243 → 243.1 → 243.1.1
20	Z	e8rtdZ1	Z:179-389	TrbI	517 → 517.2 → 517.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors