ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 8SAL

ELECTRON MICROSCOPY12 chains18 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain ACH0848.3.D0358.80.06CHIM.DS.6R.SOSIP gp120view chain

3 domains

e8salA1(A:3-89,A:172-224,A:436-459)e8salA2(A:90-171)e8salA3(A:225-435)

Chain BCH0848.3.D0358.80.06CHIM.DS.6R.SOSIP gp41view chain

1 domain

e8salB1(B:484-511,B:533-620)

Chain CVCR01 variable heavy chainview chain

1 domain

e8salC1(C:1-113)

Chain DVCR01 variable light chainview chain

1 domain

e8salD1(D:1-107)

Chain ECH0848.3.D0358.80.06CHIM.DS.6R.SOSIP gp120view chain

3 domains

e8salE1(E:225-435)e8salE2(E:90-171)e8salE3(E:3-89,E:172-224,E:436-460)

Chain FCH0848.3.D0358.80.06CHIM.DS.6R.SOSIP gp41view chain

1 domain

e8salF1(F:485-510,F:533-619)

Chain GVCR01 variable heavy chainview chain

1 domain

e8salG1(G:1-113)

Chain HVCR01 variable light chainview chain

1 domain

e8salH1(H:1-107)

Chain ICH0848.3.D0358.80.06CHIM.DS.6R.SOSIP gp120view chain

3 domains

e8salI1(I:90-171)e8salI2(I:225-435)e8salI3(I:3-89,I:172-224,I:436-458)

Chain JCH0848.3.D0358.80.06CHIM.DS.6R.SOSIP gp41view chain

1 domain

e8salJ1(J:484-511,J:533-621)

Chain KVCR01 variable heavy chainview chain

1 domain

e8salK1(K:1-113)

Chain LVCR01 variable light chainview chain

1 domain

e8salL1(L:1-107)

All Domains (18)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8salA1	A:3-89,A:172-224,A:436-459	GP120	1061 → 1061.1 → 1061.1.1
2	A	e8salA2	A:90-171	GP120	6173 → 6173.1 → 6173.1.1
3	A	e8salA3	A:225-435	GP120	259 → 259.1 → 259.1.1
4	B	e8salB1	B:484-511,B:533-620	GP41	3567 → 3567.1 → 3567.1.1
5	C	e8salC1	C:1-113	V-set	11 → 11.1 → 11.1.1
6	D	e8salD1	D:1-107	V-set	11 → 11.1 → 11.1.1
7	E	e8salE1	E:225-435	GP120	259 → 259.1 → 259.1.1
8	E	e8salE2	E:90-171	GP120	6173 → 6173.1 → 6173.1.1
9	E	e8salE3	E:3-89,E:172-224,E:436-460	GP120	1061 → 1061.1 → 1061.1.1
10	F	e8salF1	F:485-510,F:533-619	GP41	3567 → 3567.1 → 3567.1.1
11	G	e8salG1	G:1-113	V-set	11 → 11.1 → 11.1.1
12	H	e8salH1	H:1-107	V-set	11 → 11.1 → 11.1.1
13	I	e8salI1	I:90-171	GP120	6173 → 6173.1 → 6173.1.1
14	I	e8salI2	I:225-435	GP120	259 → 259.1 → 259.1.1
15	I	e8salI3	I:3-89,I:172-224,I:436-458	GP120	1061 → 1061.1 → 1061.1.1
16	J	e8salJ1	J:484-511,J:533-621	GP41	3567 → 3567.1 → 3567.1.1
17	K	e8salK1	K:1-113	V-set	11 → 11.1 → 11.1.1
18	L	e8salL1	L:1-107	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors