ECODEvolutionary Classification of Protein Domains

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PDB 8SMV

ELECTRON MICROSCOPY5 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AGuanine nucleotide-binding protein G(s) subunit alpha isoforms shortview chain

1 domain

e8smvA1(A:61-260)

Chain BGuanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1view chain

1 domain

e8smvB01(B:10-339)

Chain GGuanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2view chain

1 domain

e8smvG1(G:5-64)

Chain NNanobody 35view chain

1 domain

e8smvN1(N:1-126)

Chain RG-protein coupled receptor 161view chain

2 domains

e8smvR01(R:36-164,R:166-181,R:183-215,R:259-333)e8smvR02(R:165,R:182,R:216-258)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8smvA1	A:61-260	G-alpha	135 → 135.1 → 135.1.1
2	B	e8smvB01	B:10-339	WD40, WD40_Gbeta	5 → 5.1 → 5.1.4
3	G	e8smvG1	G:5-64	G-gamma	153 → 153.1 → 153.1.1
4	N	e8smvN1	N:1-126	V-set	11 → 11.1 → 11.1.1
5	R	e8smvR01	R:36-164,R:166-181,R:183-215,R:259-333	7tm_1	5001 → 5001.1 → 5001.1.1
6	R	e8smvR02	R:165,R:182,R:216-258	601.2.1.0	601 → 601.2 → 601.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors