ECODEvolutionary Classification of Protein Domains

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PDB 8U13

ELECTRON MICROSCOPY11 chains9 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AHistone H3.1view chain

1 domain

e8u13A1(A:42-140)

Chain BHistone H4view chain

1 domain

e8u13B1(B:26-107)

Chain CHistone H2A type 1-B/Eview chain

1 domain

e8u13C1(C:1-119)

Chain DHistone H2B type 1-C/E/F/G/Iview chain

1 domain

e8u13D1(D:38-128)

Chain EHistone H3.1view chain

1 domain

e8u13E1(E:42-140)

Chain FHistone H4view chain

1 domain

e8u13F1(F:26-107)

Chain GHistone H2A type 1-B/Eview chain

1 domain

e8u13G1(G:1-119)

Chain HHistone H2B type 1-C/E/F/G/Iview chain

1 domain

e8u13H1(H:38-128)

Chain KE3 ubiquitin-protein ligase RNF168view chain

1 domain

e8u13K01(K:1-99)

All Domains (9)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8u13A1	A:42-140	Histone	148 → 148.1 → 148.1.1
2	B	e8u13B1	B:26-107	CENP-T_C	148 → 148.1 → 148.1.1
3	C	e8u13C1	C:1-119	Histone,Histone_H2A_C	148 → 148.1 → 148.1.1
4	D	e8u13D1	D:38-128	Histone	148 → 148.1 → 148.1.1
5	E	e8u13E1	E:42-140	Histone	148 → 148.1 → 148.1.1
6	F	e8u13F1	F:26-107	CENP-T_C	148 → 148.1 → 148.1.1
7	G	e8u13G1	G:1-119	Histone,Histone_H2A_C	148 → 148.1 → 148.1.1
8	H	e8u13H1	H:38-128	Histone	148 → 148.1 → 148.1.1
9	K	e8u13K01	K:1-99	Prok-RING_4	376 → 376.1 → 376.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors