ECODEvolutionary Classification of Protein Domains

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PDB 8UU5

ELECTRON MICROSCOPY51 chains51 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Large ribosomal subunit protein uL29view chain

1 domain

e8uu511(1:3-61)

Chain 2Large ribosomal subunit protein uL30view chain

1 domain

e8uu521(2:3-58)

Chain 3Large ribosomal subunit protein bL31Bview chain

1 domain

e8uu531(3:1-79)

Chain 4Large ribosomal subunit protein bL32view chain

1 domain

e8uu541(4:2-54)

Chain 5Large ribosomal subunit protein bL33view chain

1 domain

e8uu551(5:2-48)

Chain 6Large ribosomal subunit protein bL34view chain

1 domain

e8uu561(6:2-43)

Chain 7Large ribosomal subunit protein bL35view chain

1 domain

e8uu571(7:2-64)

Chain 8Large ribosomal subunit protein bL36view chain

1 domain

e8uu581(8:1-36)

Chain bSmall ribosomal subunit protein uS2view chain

1 domain

e8uu5b1(b:1-229)

Chain cSmall ribosomal subunit protein uS3view chain

2 domains

e8uu5c1(c:2-104)e8uu5c2(c:105-205)

Chain CLarge ribosomal subunit protein uL2view chain

2 domains

e8uu5C1(C:126-274)e8uu5C2(C:2-125)

Chain dSmall ribosomal subunit protein uS4view chain

1 domain

e8uu5d1(d:1-200)

Chain DLarge ribosomal subunit protein uL3view chain

1 domain

e8uu5D1(D:1-209)

Chain eSmall ribosomal subunit protein uS5view chain

2 domains

e8uu5e1(e:1-79)e8uu5e2(e:80-167)

Chain ELarge ribosomal subunit protein uL4view chain

1 domain

e8uu5E1(E:4-206)

Chain fSmall ribosomal subunit protein bS6view chain

1 domain

e8uu5f1(f:1-97)

Chain FLarge ribosomal subunit protein uL5view chain

1 domain

e8uu5F1(F:2-176)

Chain gSmall ribosomal subunit protein uS7view chain

1 domain

e8uu5g1(g:12-152)

Chain GLarge ribosomal subunit protein uL6view chain

2 domains

e8uu5G1(G:1-88)e8uu5G2(G:89-170)

Chain hSmall ribosomal subunit protein uS8view chain

2 domains

e8uu5h1(h:3-67)e8uu5h2(h:68-132)

Chain iSmall ribosomal subunit protein uS9view chain

1 domain

e8uu5i1(i:1-130)

Chain jSmall ribosomal subunit protein uS10view chain

1 domain

e8uu5j1(j:5-100)

Chain kSmall ribosomal subunit protein uS11view chain

1 domain

e8uu5k1(k:16-129)

Chain lSmall ribosomal subunit protein uS12view chain

1 domain

e8uu5l1(l:2-135)

Chain LLarge ribosomal subunit protein uL13view chain

1 domain

e8uu5L1(L:1-145)

Chain mSmall ribosomal subunit protein uS13view chain

1 domain

e8uu5m1(m:4-117)

Chain MLarge ribosomal subunit protein uL14view chain

1 domain

e8uu5M1(M:1-122)

Chain nSmall ribosomal subunit protein uS14view chain

1 domain

e8uu5n1(n:2-61)

Chain NLarge ribosomal subunit protein uL15view chain

1 domain

e8uu5N1(N:1-146)

Chain oSmall ribosomal subunit protein uS15view chain

1 domain

e8uu5o1(o:3-88)

Chain OLarge ribosomal subunit protein uL16view chain

1 domain

e8uu5O1(O:2-134)

Chain pSmall ribosomal subunit protein bS16view chain

1 domain

e8uu5p1(p:1-90)

Chain PLarge ribosomal subunit protein bL17view chain

1 domain

e8uu5P1(P:1-135)

Chain qSmall ribosomal subunit protein uS17view chain

1 domain

e8uu5q1(q:4-83)

Chain QLarge ribosomal subunit protein uL18view chain

1 domain

e8uu5Q1(Q:1-119)

Chain rSmall ribosomal subunit protein bS18view chain

1 domain

e8uu5r1(r:14-75)

Chain RLarge ribosomal subunit protein bL19view chain

1 domain

e8uu5R1(R:1-114)

Chain sSmall ribosomal subunit protein uS19view chain

1 domain

e8uu5s1(s:3-83)

Chain SLarge ribosomal subunit protein bL20view chain

1 domain

e8uu5S1(S:2-117)

Chain tSmall ribosomal subunit protein bS20view chain

1 domain

e8uu5t1(t:2-81)

Chain TLarge ribosomal subunit protein bL21view chain

1 domain

e8uu5T1(T:1-102)

Chain ULarge ribosomal subunit protein uL22view chain

1 domain

e8uu5U1(U:6-115)

Chain VLarge ribosomal subunit protein uL23view chain

1 domain

e8uu5V1(V:1-94)

Chain WLarge ribosomal subunit protein uL24view chain

1 domain

e8uu5W1(W:1-103)

Chain YLarge ribosomal subunit protein bL27view chain

1 domain

e8uu5Y1(Y:19-91)

Chain ZLarge ribosomal subunit protein bL28view chain

1 domain

e8uu5Z1(Z:3-60)

All Domains (51)

#	Chain	Domain ID	Range	Family	Classification
1	1	e8uu511	1:3-61	Ribosomal_L29	192 → 192.4 → 192.4.1
2	2	e8uu521	2:3-58	Ribosomal_L30	887 → 887.1 → 887.1.1
3	3	e8uu531	3:1-79	Ribosomal_L31	4987 → 4987.1 → 4987.1.1
4	4	e8uu541	4:2-54	Ribosomal_L32p	375 → 375.1 → 375.1.1
5	5	e8uu551	5:2-48	Ribosomal_L33	375 → 375.1 → 375.1.1
6	6	e8uu561	6:2-43	Ribosomal_L34	3074 → 3074.1 → 3074.1.1
7	7	e8uu571	7:2-64	Ribosomal_L35p	4281 → 4281.1 → 4281.1.1
8	8	e8uu581	8:1-36	Ribosomal_L36	919 → 919.1 → 919.1.1
9	b	e8uu5b1	b:1-229	Ribosomal_S2	2007 → 2007.6 → 2007.6.1
10	c	e8uu5c1	c:2-104	KH_2	327 → 327.11 → 327.11.1
11	c	e8uu5c2	c:105-205	Ribosomal_S3_C	230 → 230.2 → 230.2.1
12	C	e8uu5C1	C:126-274	Ribosomal_L2_C	4 → 4.1 → 4.1.1
13	C	e8uu5C2	C:2-125	Ribosomal_L2	2 → 2.1 → 2.1.1
14	d	e8uu5d1	d:1-200	Ribosomal_S4,S4	221 → 221.1 → 221.1.2
15	D	e8uu5D1	D:1-209	Ribosomal_L3	1 → 1.1 → 1.1.7
16	e	e8uu5e1	e:1-79	Ribosomal_S5	3274 → 3274.1 → 3274.1.1
17	e	e8uu5e2	e:80-167	Ribosomal_S5_C	212 → 212.1 → 212.1.1
18	E	e8uu5E1	E:4-206	Ribosomal_L4	7559 → 7559.1 → 7559.1.1
19	f	e8uu5f1	f:1-97	Ribosomal_S6	304 → 304.12 → 304.12.1
20	F	e8uu5F1	F:2-176	Ribosomal_L5,Ribosomal_L5_C	882 → 882.1 → 882.1.1
21	g	e8uu5g1	g:12-152	Ribosomal_S7	167 → 167.1 → 167.1.1
22	G	e8uu5G1	G:1-88	Ribosomal_L6	318 → 318.1 → 318.1.1
23	G	e8uu5G2	G:89-170	Ribosomal_L6	318 → 318.1 → 318.1.1
24	h	e8uu5h1	h:3-67	Ribosomal_S8	320 → 320.2 → 320.2.1
25	h	e8uu5h2	h:68-132	Ribosomal_S8	4988 → 4988.1 → 4988.1.1
26	i	e8uu5i1	i:1-130	Ribosomal_S9	212 → 212.1 → 212.1.1
27	j	e8uu5j1	j:5-100	Ribosomal_S10	304 → 304.44 → 304.44.1
28	k	e8uu5k1	k:16-129	Ribosomal_S11	2484 → 2484.1 → 2484.1.1
29	l	e8uu5l1	l:2-135	Ribosom_S12_S23	2 → 2.1 → 2.1.1
30	L	e8uu5L1	L:1-145	Ribosomal_L13	2490 → 2490.2 → 2490.2.1
31	m	e8uu5m1	m:4-117	Ribosomal_S13	102 → 102.2 → 102.2.1
32	M	e8uu5M1	M:1-122	Ribosomal_L14	3174 → 3174.1 → 3174.1.1
33	n	e8uu5n1	n:2-61	Ribosomal_S14	377 → 377.1 → 377.1.1
34	N	e8uu5N1	N:1-146	Ribosomal_L27A, Ribosomal_uL15_N	2490 → 2490.3 → 2490.3.1
35	o	e8uu5o1	o:3-88	Ribosomal_S15	616 → 616.1 → 616.1.1
36	O	e8uu5O1	O:2-134	Ribosomal_L16	325 → 325.1 → 325.1.5
37	p	e8uu5p1	p:1-90	Ribosomal_S16	837 → 837.1 → 837.1.1
38	P	e8uu5P1	P:1-135	Ribosomal_L17	218 → 218.3 → 218.3.1
39	q	e8uu5q1	q:4-83	Ribosomal_S17	2 → 2.1 → 2.1.1
40	Q	e8uu5Q1	Q:1-119	Ribosomal_L18p	2484 → 2484.1 → 2484.1.1
41	r	e8uu5r1	r:14-75	Ribosomal_S18	101 → 101.1 → 101.1.1
42	R	e8uu5R1	R:1-114	Ribosomal_L19	4 → 4.1 → 4.1.1
43	s	e8uu5s1	s:3-83	Ribosomal_S19	838 → 838.1 → 838.1.1
44	S	e8uu5S1	S:2-117	Ribosomal_L20	143 → 143.2 → 143.2.1
45	t	e8uu5t1	t:2-81	Ribosomal_S20p	604 → 604.9 → 604.9.1
46	T	e8uu5T1	T:1-102	Ribosomal_L21p	4186 → 4186.1 → 4186.1.1
47	U	e8uu5U1	U:6-115	Ribosomal_L22	218 → 218.2 → 218.2.1
48	V	e8uu5V1	V:1-94	Ribosomal_L23	304 → 304.109 → 304.109.1
49	W	e8uu5W1	W:1-103	KOW,ribosomal_L24	4 → 4.1 → 4.1.1
50	Y	e8uu5Y1	Y:19-91	Ribosomal_L27	325 → 325.1 → 325.1.8
51	Z	e8uu5Z1	Z:3-60	Ribosomal_L28	4232 → 4232.1 → 4232.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors