ECODEvolutionary Classification of Protein Domains

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PDB 8W84

X-RAY DIFFRACTION2.10 Å4 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ADQN0344AE02 Fab heavy chainview chain

2 domains

e8w84A1(A:1-123)e8w84A2(A:124-223)

Chain BDQN0344AE02 Fab light chainview chain

2 domains

e8w84B1(B:109-212)e8w84B2(B:1-108)

Chain CHLA class II histocompatibility antigen, DQ alpha 1 chainview chain

2 domains

e8w84C1(C:1-83)e8w84C2(C:84-188)

Chain DMHC class II HLA-DQ-beta-1 - alpha2 gliadin peptide chimeric proteinview chain

2 domains

e8w84D1(D:1093-1192)e8w84D2(D:-2-10,D:1003-1092)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8w84A1	A:1-123	V-set	11 → 11.1 → 11.1.1
2	A	e8w84A2	A:124-223	C1-set	11 → 11.1 → 11.1.1
3	B	e8w84B1	B:109-212	C1-set	11 → 11.1 → 11.1.1
4	B	e8w84B2	B:1-108	V-set	11 → 11.1 → 11.1.1
5	C	e8w84C1	C:1-83	MHC_II_alpha	233 → 233.1 → 233.1.1
6	C	e8w84C2	C:84-188	C1-set	11 → 11.1 → 11.1.1
7	D	e8w84D1	D:1093-1192	C1-set	11 → 11.1 → 11.1.1
8	D	e8w84D2	D:-2-10,D:1003-1092	MHC_II_beta	233 → 233.1 → 233.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors