PDB 8XX4
11 chains24 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
9 domains
e8xx4A01(A:1-311,A:393-395,A:437-439,A:539-541,A:561,A:576,A:581-586,A:612,A:711-712,A:725,A:768,A:891-895,A:972-974,A:984-986,A:1098-1101)e8xx4A02(A:312-349,A:410-436,A:440-496)e8xx4A03(A:350-392,A:396-409)e8xx4A04(A:497-538,A:542-560,A:562-575,A:577-580,A:587-611,A:613-650)e8xx4A05(A:651-710,A:713-724,A:726-767,A:769-859)e8xx4A06(A:860-890,A:896-971,A:975-983,A:987-1037)e8xx4A07(A:1038-1079,A:1140-1141,A:1157-1158,A:1231-1233,A:1255-1257,A:1289-1437)e8xx4A08(A:1080-1097,A:1102-1111,A:1228-1230,A:1234-1254,A:1258-1288)e8xx4A09(A:1112-1139,A:1142-1156,A:1159-1227)
7 domains
e8xx4B01(B:10-155,B:157-226,B:300-304,B:313-315,B:321-322,B:329-330,B:343-346,B:352-353,B:363-366,B:432,B:445-505,B:507-589,B:609-610)e8xx4B02(B:156,B:227-299,B:305-312,B:316-320,B:323-328,B:331-342,B:347-351,B:354-362,B:367-431,B:433-444,B:506)e8xx4B03(B:590-608,B:611-676,B:702-708)e8xx4B04(B:709-854)e8xx4B05(B:855-886,B:888-892,B:1006-1129)e8xx4B06(B:887,B:893-1005)e8xx4B07(B:1130-1210)
3 domains
2 domains
1 domain
2 domains
All Domains (24)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8xx4A01 | A:1-311,A:393-395,A:437-439,A:539-541,A:561,A:576,A:581-586,A:612,A:711-712,A:725,A:768,A:891-895,A:972-974,A:984-986,A:1098-1101 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 2 | A | e8xx4A02 | A:312-349,A:410-436,A:440-496 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 3 | A | e8xx4A03 | A:350-392,A:396-409 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 4 | A | e8xx4A04 | A:497-538,A:542-560,A:562-575,A:577-580,A:587-611,A:613-650 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 5 | A | e8xx4A05 | A:651-710,A:713-724,A:726-767,A:769-859 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 6 | A | e8xx4A06 | A:860-890,A:896-971,A:975-983,A:987-1037 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 7 | A | e8xx4A07 | A:1038-1079,A:1140-1141,A:1157-1158,A:1231-1233,A:1255-1257,A:1289-1437 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 8 | A | e8xx4A08 | A:1080-1097,A:1102-1111,A:1228-1230,A:1234-1254,A:1258-1288 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 9 | A | e8xx4A09 | A:1112-1139,A:1142-1156,A:1159-1227 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 10 | B | e8xx4B01 | B:10-155,B:157-226,B:300-304,B:313-315,B:321-322,B:329-330,B:343-346,B:352-353,B:363-366,B:432,B:445-505,B:507-589,B:609-610 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 11 | B | e8xx4B02 | B:156,B:227-299,B:305-312,B:316-320,B:323-328,B:331-342,B:347-351,B:354-362,B:367-431,B:433-444,B:506 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 12 | B | e8xx4B03 | B:590-608,B:611-676,B:702-708 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 13 | B | e8xx4B04 | B:709-854 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 14 | B | e8xx4B05 | B:855-886,B:888-892,B:1006-1129 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 15 | B | e8xx4B06 | B:887,B:893-1005 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 16 | B | e8xx4B07 | B:1130-1210 | RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 17 | C | e8xx4C01 | C:42-68,C:73-76,C:181-186 | 305.1.1.0 | 305 → 305.1 → 305.1.1 |
| 18 | C | e8xx4C02 | C:69-72,C:77-180 | 240.2.1.0 | 240 → 240.2 → 240.2.1 |
| 19 | C | e8xx4C03 | C:298-358 | 305.1.1.0 | 305 → 305.1 → 305.1.1 |
| 20 | D | e8xx4D1 | D:114-134 | 2008.3.1.0 | 2008 → 2008.3 → 2008.3.1 |
| 21 | D | e8xx4D2 | D:135-205 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 22 | E | e8xx4E01 | E:39-147 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 23 | G | e8xx4G1 | G:1-45 | 375.1.1.0 | 375 → 375.1 → 375.1.1 |
| 24 | G | e8xx4G2 | G:46-103 | 375.1.1.0 | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors