ECODEvolutionary Classification of Protein Domains

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PDB 8YKX

5 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AGuanine nucleotide-binding protein G(i) subunit alpha-1view chain

1 domain

e8ykxA1(A:32-54,A:182-354)

Chain BGuanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1view chain

1 domain

e8ykxB1(B:2-340)

Chain EAntibody fragment ScFv16view chain

2 domains

e8ykxE1(E:1-119)e8ykxE2(E:120-247)

Chain GGuanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2view chain

1 domain

e8ykxG1(G:5-64)

Chain RSuccinate receptor 1view chain

2 domains

e8ykxR1(R:46-224,R:264-306)e8ykxR2(R:225-263)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8ykxA1	A:32-54,A:182-354	G-alpha	2004 → 2004.1 → 2004.1.1
2	B	e8ykxB1	B:2-340	WD40, WD40_Gbeta	5 → 5.1 → 5.1.4
3	E	e8ykxE1	E:1-119	V-set	11 → 11.1 → 11.1.1
4	E	e8ykxE2	E:120-247	V-set	11 → 11.1 → 11.1.1
5	G	e8ykxG1	G:5-64	G-gamma	153 → 153.1 → 153.1.1
6	R	e8ykxR1	R:46-224,R:264-306	7tm_1	5001 → 5001.1 → 5001.1.1
7	R	e8ykxR2	R:225-263	375.1.1.0	375 → 375.1 → 375.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors