PDB 8Z6R
9 chains36 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain ASpike glycoprotein,Fibritin,Spike glycoprotein,Fibritin,Spike glycoprotein,Fibritin,Expression Tagview chain
6 domainsChain BSpike glycoprotein,Fibritin,Spike glycoprotein,Fibritin,Spike glycoprotein,Fibritin,Expression Tagview chain
6 domainsChain CSpike glycoprotein,Fibritin,Spike glycoprotein,Fibritin,Spike glycoprotein,Fibritin,Expression Tagview chain
6 domains2 domains
4 domains
2 domains
4 domains
2 domains
4 domains
All Domains (36)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8z6rA1 | A:1-296,A:442-447,A:454-454,A:593-594,A:614-615,A:660-661,A:720-722 | bCoV_S1_N | 10 → 10.1 → 10.1.1 |
| 2 | A | e8z6rA2 | A:270-343 | bCoV_S1_N | 10 → 10.1 → 10.1.1 |
| 3 | A | e8z6rA3 | A:344-441,A:448-453,A:455-563 | bCoV_S1_RBD | 4169 → 4169.1 → 4169.1.1 |
| 4 | A | e8z6rA4 | A:564-592,A:595-613,A:616-659,A:662-719,A:723-748 | 1043.1.1.0 | 1043 → 1043.1 → 1043.1.1 |
| 5 | A | e8z6rA5 | A:749-1131 | CoV_S2 | 1042 → 1042.1 → 1042.1.1 |
| 6 | A | e8z6rA6 | A:1222-1248 | Fibritin_C | 3567 → 3567.1 → 3567.1.1 |
| 7 | B | e8z6rB1 | B:1-296,B:442-447,B:454-454,B:593-594,B:614-615,B:660-661,B:720-722 | bCoV_S1_N | 10 → 10.1 → 10.1.1 |
| 8 | B | e8z6rB2 | B:270-343 | bCoV_S1_N | 10 → 10.1 → 10.1.1 |
| 9 | B | e8z6rB3 | B:344-441,B:448-453,B:455-563 | bCoV_S1_RBD | 4169 → 4169.1 → 4169.1.1 |
| 10 | B | e8z6rB4 | B:564-592,B:595-613,B:616-659,B:662-719,B:723-748 | 1043.1.1.0 | 1043 → 1043.1 → 1043.1.1 |
| 11 | B | e8z6rB5 | B:749-1131 | CoV_S2 | 1042 → 1042.1 → 1042.1.1 |
| 12 | B | e8z6rB6 | B:1222-1248 | Fibritin_C | 3567 → 3567.1 → 3567.1.1 |
| 13 | C | e8z6rC1 | C:1-296,C:442-447,C:454-454,C:593-594,C:614-615,C:660-661,C:720-722 | bCoV_S1_N | 10 → 10.1 → 10.1.1 |
| 14 | C | e8z6rC2 | C:270-343 | bCoV_S1_N | 10 → 10.1 → 10.1.1 |
| 15 | C | e8z6rC3 | C:344-441,C:448-453,C:455-563 | bCoV_S1_RBD | 4169 → 4169.1 → 4169.1.1 |
| 16 | C | e8z6rC4 | C:564-592,C:595-613,C:616-659,C:662-719,C:723-748 | 1043.1.1.0 | 1043 → 1043.1 → 1043.1.1 |
| 17 | C | e8z6rC5 | C:749-1131 | CoV_S2 | 1042 → 1042.1 → 1042.1.1 |
| 18 | C | e8z6rC6 | C:1222-1248 | Fibritin_C | 3567 → 3567.1 → 3567.1.1 |
| 19 | D | e8z6rD1 | D:1-110 | V-set | 11 → 11.1 → 11.1.1 |
| 20 | D | e8z6rD2 | D:111-215 | C1-set | 11 → 11.1 → 11.1.1 |
| 21 | E | e8z6rE1 | E:1-122 | V-set | 11 → 11.1 → 11.1.1 |
| 22 | E | e8z6rE2 | E:123-232 | C1-set | 11 → 11.1 → 11.1.1 |
| 23 | E | e8z6rE3 | E:233-345 | C1-set | 11 → 11.1 → 11.1.1 |
| 24 | E | e8z6rE4 | E:346-446 | C1-set | 11 → 11.1 → 11.1.1 |
| 25 | F | e8z6rF1 | F:1-110 | V-set | 11 → 11.1 → 11.1.1 |
| 26 | F | e8z6rF2 | F:111-215 | C1-set | 11 → 11.1 → 11.1.1 |
| 27 | G | e8z6rG1 | G:1-122 | V-set | 11 → 11.1 → 11.1.1 |
| 28 | G | e8z6rG2 | G:123-232 | C1-set | 11 → 11.1 → 11.1.1 |
| 29 | G | e8z6rG3 | G:233-345 | C1-set | 11 → 11.1 → 11.1.1 |
| 30 | G | e8z6rG4 | G:346-446 | C1-set | 11 → 11.1 → 11.1.1 |
| 31 | H | e8z6rH1 | H:1-110 | V-set | 11 → 11.1 → 11.1.1 |
| 32 | H | e8z6rH2 | H:111-215 | C1-set | 11 → 11.1 → 11.1.1 |
| 33 | I | e8z6rI1 | I:1-122 | V-set | 11 → 11.1 → 11.1.1 |
| 34 | I | e8z6rI2 | I:123-232 | C1-set | 11 → 11.1 → 11.1.1 |
| 35 | I | e8z6rI3 | I:233-345 | C1-set | 11 → 11.1 → 11.1.1 |
| 36 | I | e8z6rI4 | I:346-446 | C1-set | 11 → 11.1 → 11.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors