ECODEvolutionary Classification of Protein Domains

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PDB 8ZK2

36 chains37 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain aBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2a1(a:1-68)

Chain AAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2A1(A:1-67)

Chain bAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2b1(b:1-67)

Chain BBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2B1(B:1-68)

Chain cBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2c1(c:1-68)

Chain CPhotosynthetic reaction center cytochrome c subunitview chain

1 domain

e8zk2C01(C:54-357)

Chain dAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2d1(d:1-67)

Chain DBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2D1(D:1-68)

Chain eBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2e1(e:1-68)

Chain EAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2E1(E:1-67)

Chain fAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2f1(f:1-67)

Chain FBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2F1(F:1-68)

Chain gBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2g1(g:1-68)

Chain GAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2G1(G:1-67)

Chain hAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2h1(h:1-67)

Chain HPhotosynthetic reaction center H subunitview chain

2 domains

e8zk2H01(H:1-34)e8zk2H02(H:35-253)

Chain iBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2i1(i:1-68)

Chain IBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2I1(I:1-68)

Chain jAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2j1(j:1-67)

Chain JAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2J1(J:1-67)

Chain KBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2K1(K:1-68)

Chain LReaction center protein L chainview chain

1 domain

e8zk2L01(L:1-274)

Chain MReaction center protein M chainview chain

1 domain

e8zk2M01(M:1-316)

Chain NAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2N1(N:1-67)

Chain OBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2O1(O:1-68)

Chain PAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2P1(P:1-67)

Chain QBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2Q1(Q:1-68)

Chain RAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2R1(R:1-67)

Chain SBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2S1(S:1-68)

Chain TAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2T1(T:1-67)

Chain UBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2U1(U:1-68)

Chain VAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2V1(V:1-67)

Chain WBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2W1(W:1-68)

Chain XAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2X1(X:1-67)

Chain YBeta subunit of light-harvesting 1 complexview chain

1 domain

e8zk2Y1(Y:1-68)

Chain ZAlpha subunit of light-harvesting 1 complexview chain

1 domain

e8zk2Z1(Z:1-67)

All Domains (37)

#	Chain	Domain ID	Range	Family	Classification
1	a	e8zk2a1	a:1-68	LHC	5074 → 5074.1 → 5074.1.1
2	A	e8zk2A1	A:1-67	LHC	5074 → 5074.1 → 5074.1.1
3	b	e8zk2b1	b:1-67	LHC	5074 → 5074.1 → 5074.1.1
4	B	e8zk2B1	B:1-68	LHC	5074 → 5074.1 → 5074.1.1
5	c	e8zk2c1	c:1-68	LHC	5074 → 5074.1 → 5074.1.1
6	C	e8zk2C01	C:54-357	CytoC_RC	139 → 139.3 → 139.3.1
7	d	e8zk2d1	d:1-67	LHC	5074 → 5074.1 → 5074.1.1
8	D	e8zk2D1	D:1-68	LHC	5074 → 5074.1 → 5074.1.1
9	e	e8zk2e1	e:1-68	LHC	5074 → 5074.1 → 5074.1.1
10	E	e8zk2E1	E:1-67	LHC	5074 → 5074.1 → 5074.1.1
11	f	e8zk2f1	f:1-67	LHC	5074 → 5074.1 → 5074.1.1
12	F	e8zk2F1	F:1-68	LHC	5074 → 5074.1 → 5074.1.1
13	g	e8zk2g1	g:1-68	LHC	5074 → 5074.1 → 5074.1.1
14	G	e8zk2G1	G:1-67	LHC	5074 → 5074.1 → 5074.1.1
15	h	e8zk2h1	h:1-67	LHC	5074 → 5074.1 → 5074.1.1
16	H	e8zk2H01	H:1-34	PRCH	5002 → 5002.1 → 5002.1.1
17	H	e8zk2H02	H:35-253	Photosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain	4 → 4.6 → 4.6.1
18	i	e8zk2i1	i:1-68	LHC	5074 → 5074.1 → 5074.1.1
19	I	e8zk2I1	I:1-68	LHC	5074 → 5074.1 → 5074.1.1
20	j	e8zk2j1	j:1-67	LHC	5074 → 5074.1 → 5074.1.1
21	J	e8zk2J1	J:1-67	LHC	5074 → 5074.1 → 5074.1.1
22	K	e8zk2K1	K:1-68	LHC	5074 → 5074.1 → 5074.1.1
23	L	e8zk2L01	L:1-274	Photo_RC	5037 → 5037.1 → 5037.1.1
24	M	e8zk2M01	M:1-316	Photo_RC	5037 → 5037.1 → 5037.1.1
25	N	e8zk2N1	N:1-67	LHC	5074 → 5074.1 → 5074.1.1
26	O	e8zk2O1	O:1-68	LHC	5074 → 5074.1 → 5074.1.1
27	P	e8zk2P1	P:1-67	LHC	5074 → 5074.1 → 5074.1.1
28	Q	e8zk2Q1	Q:1-68	LHC	5074 → 5074.1 → 5074.1.1
29	R	e8zk2R1	R:1-67	LHC	5074 → 5074.1 → 5074.1.1
30	S	e8zk2S1	S:1-68	LHC	5074 → 5074.1 → 5074.1.1
31	T	e8zk2T1	T:1-67	LHC	5074 → 5074.1 → 5074.1.1
32	U	e8zk2U1	U:1-68	LHC	5074 → 5074.1 → 5074.1.1
33	V	e8zk2V1	V:1-67	LHC	5074 → 5074.1 → 5074.1.1
34	W	e8zk2W1	W:1-68	LHC	5074 → 5074.1 → 5074.1.1
35	X	e8zk2X1	X:1-67	LHC	5074 → 5074.1 → 5074.1.1
36	Y	e8zk2Y1	Y:1-68	LHC	5074 → 5074.1 → 5074.1.1
37	Z	e8zk2Z1	Z:1-67	LHC	5074 → 5074.1 → 5074.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors