ECODEvolutionary Classification of Protein Domains

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PDB 9GGG

5 chains6 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AEngineered miniGqview chain

1 domain

e9gggA1(A:32-246)

Chain BGuanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1view chain

1 domain

e9gggB1(B:2-340)

Chain CGuanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2view chain

1 domain

e9gggC1(C:5-64)

Chain RThromboxane A2 receptorview chain

1 domain

e9gggR1(R:28-321)

Chain SAntibody fragment scFv16view chain

2 domains

e9gggS1(S:120-248)e9gggS2(S:1-119)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e9gggA1	A:32-246	Arf, G-alpha	2004 → 2004.1 → 2004.1.1
2	B	e9gggB1	B:2-340	WD40, WD40_Gbeta	5 → 5.1 → 5.1.4
3	C	e9gggC1	C:5-64	G-gamma	153 → 153.1 → 153.1.1
4	R	e9gggR1	R:28-321	5001.1.1.0	5001 → 5001.1 → 5001.1.1
5	S	e9gggS1	S:120-248	V-set	11 → 11.1 → 11.1.1
6	S	e9gggS2	S:1-119	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors