ECODEvolutionary Classification of Protein Domains

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PDB 9GNW

20 chains13 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain APhotosystem II protein D1view chain

1 domain

e9gnwA1(A:1-336)

Chain BPhotosystem II CP47 reaction center proteinview chain

2 domains

e9gnwB1(B:1-327,B:444-484)e9gnwB2(B:328-443)

Chain CPhotosystem II CP43 reaction center proteinview chain

1 domain

e9gnwC1(C:1-449)

Chain DPhotosystem II D2 proteinview chain

1 domain

e9gnwD1(D:1-348)

Chain ECytochrome b559 subunit alphaview chain

1 domain

e9gnwE1(E:1-76)

Chain FCytochrome b559 subunit betaview chain

1 domain

e9gnwF1(F:1-31)

Chain HPhotosystem II reaction center protein Hview chain

1 domain

e9gnwH1(H:1-67)

Chain KPhotosystem II reaction center protein Kview chain

1 domain

e9gnwK1(K:1-37)

Chain OPsbOview chain

1 domain

e9gnwO1(O:1-238)

Chain PPsbPview chain

1 domain

e9gnwP1(P:132-244)

Chain TPhotosystem II reaction center protein Tview chain

1 domain

e9gnwT1(T:1-30)

Chain ZPhotosystem II reaction center protein Zview chain

1 domain

e9gnwZ1(Z:1-61)

All Domains (13)

#	Chain	Domain ID	Range	Family	Classification
1	A	e9gnwA1	A:1-336	Photo_RC	5037 → 5037.1 → 5037.1.1
2	B	e9gnwB1	B:1-327,B:444-484	PSII	5075 → 5075.1 → 5075.1.1
3	B	e9gnwB2	B:328-443	PSII	3744 → 3744.1 → 3744.1.1
4	C	e9gnwC1	C:1-449	PSII	5075 → 5075.1 → 5075.1.1
5	D	e9gnwD1	D:1-348	Photo_RC	5037 → 5037.1 → 5037.1.1
6	E	e9gnwE1	E:1-76	Cytochrom_B559,Cytochrom_B559a	5036 → 5036.1 → 5036.1.1
7	F	e9gnwF1	F:1-31	Cytochrom_B559	5036 → 5036.1 → 5036.1.1
8	H	e9gnwH1	H:1-67	PsbH	5032 → 5032.1 → 5032.1.1
9	K	e9gnwK1	K:1-37	PsbK	5034 → 5034.1 → 5034.1.1
10	O	e9gnwO1	O:1-238	MSP	5084 → 5084.1 → 5084.1.1
11	P	e9gnwP1	P:132-244	PsbP	881 → 881.1 → 881.1.1
12	T	e9gnwT1	T:1-30	PsbT	3390 → 3390.1 → 3390.1.1
13	Z	e9gnwZ1	Z:1-61	Ycf9	5044 → 5044.1 → 5044.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors