ECODEvolutionary Classification of Protein Domains

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PDB 9JPB

39 chains39 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Antenna pigment protein alpha chainview chain

1 domain

e9jpb11(1:2-51)

Chain 2Antenna pigment protein beta chainview chain

1 domain

e9jpb21(2:6-49)

Chain aAntenna pigment protein beta chainview chain

1 domain

e9jpba1(a:6-49)

Chain AAntenna pigment protein alpha chainview chain

1 domain

e9jpbA1(A:2-52)

Chain bAntenna pigment protein beta chainview chain

1 domain

e9jpbb1(b:6-49)

Chain BAntenna pigment protein alpha chainview chain

1 domain

e9jpbB1(B:2-52)

Chain CPhotosynthetic reaction center cytochrome c subunitview chain

1 domain

e9jpbC1(C:51-360)

Chain dAntenna pigment protein beta chainview chain

1 domain

e9jpbd1(d:6-49)

Chain DAntenna pigment protein alpha chainview chain

1 domain

e9jpbD1(D:2-52)

Chain eAntenna pigment protein beta chainview chain

1 domain

e9jpbe1(e:6-49)

Chain EAntenna pigment protein alpha chainview chain

1 domain

e9jpbE1(E:2-52)

Chain fAntenna pigment protein beta chainview chain

1 domain

e9jpbf1(f:6-49)

Chain FAntenna pigment protein alpha chainview chain

1 domain

e9jpbF1(F:2-52)

Chain gAntenna pigment protein beta chainview chain

1 domain

e9jpbg1(g:6-49)

Chain GAntenna pigment protein alpha chainview chain

1 domain

e9jpbG1(G:2-52)

Chain HReaction center protein H chainview chain

2 domains

e9jpbH1(H:1-34)e9jpbH2(H:35-256)

Chain iAntenna pigment protein beta chainview chain

1 domain

e9jpbi1(i:7-49)

Chain IAntenna pigment protein alpha chainview chain

1 domain

e9jpbI1(I:2-52)

Chain jAntenna pigment protein beta chainview chain

1 domain

e9jpbj1(j:7-49)

Chain JAntenna pigment protein alpha chainview chain

1 domain

e9jpbJ1(J:2-51)

Chain kAntenna pigment protein beta chainview chain

1 domain

e9jpbk1(k:7-49)

Chain KAntenna pigment protein alpha chainview chain

1 domain

e9jpbK1(K:2-52)

Chain LReaction center protein L chainview chain

1 domain

e9jpbL1(L:2-275)

Chain MReaction center protein M chainview chain

1 domain

e9jpbM1(M:2-326)

Chain nAntenna pigment protein beta chainview chain

1 domain

e9jpbn1(n:6-49)

Chain NAntenna pigment protein alpha chainview chain

1 domain

e9jpbN1(N:2-52)

Chain pAntenna pigment protein beta chainview chain

1 domain

e9jpbp1(p:6-49)

Chain PAntenna pigment protein alpha chainview chain

1 domain

e9jpbP1(P:1-51)

Chain qAntenna pigment protein beta chainview chain

1 domain

e9jpbq1(q:6-49)

Chain QAntenna pigment protein alpha chainview chain

1 domain

e9jpbQ1(Q:2-52)

Chain rAntenna pigment protein beta chainview chain

1 domain

e9jpbr1(r:7-49)

Chain RAntenna pigment protein alpha chainview chain

1 domain

e9jpbR1(R:2-52)

Chain sAntenna pigment protein beta chainview chain

1 domain

e9jpbs1(s:6-49)

Chain SAntenna pigment protein alpha chainview chain

1 domain

e9jpbS1(S:2-52)

Chain tAntenna pigment protein beta chainview chain

1 domain

e9jpbt1(t:7-49)

Chain TAntenna pigment protein alpha chainview chain

1 domain

e9jpbT1(T:2-52)

Chain vAntenna pigment protein beta chainview chain

1 domain

e9jpbv1(v:10-49)

Chain VAntenna pigment protein alpha chainview chain

1 domain

e9jpbV1(V:2-52)

All Domains (39)

#	Chain	Domain ID	Range	Family	Classification
1	1	e9jpb11	1:2-51	LHC	5074 → 5074.1 → 5074.1.1
2	2	e9jpb21	2:6-49	LHC	5074 → 5074.1 → 5074.1.1
3	a	e9jpba1	a:6-49	LHC	5074 → 5074.1 → 5074.1.1
4	A	e9jpbA1	A:2-52	LHC	5074 → 5074.1 → 5074.1.1
5	b	e9jpbb1	b:6-49	LHC	5074 → 5074.1 → 5074.1.1
6	B	e9jpbB1	B:2-52	LHC	5074 → 5074.1 → 5074.1.1
7	C	e9jpbC1	C:51-360	CytoC_RC	139 → 139.3 → 139.3.1
8	d	e9jpbd1	d:6-49	LHC	5074 → 5074.1 → 5074.1.1
9	D	e9jpbD1	D:2-52	LHC	5074 → 5074.1 → 5074.1.1
10	e	e9jpbe1	e:6-49	LHC	5074 → 5074.1 → 5074.1.1
11	E	e9jpbE1	E:2-52	LHC	5074 → 5074.1 → 5074.1.1
12	f	e9jpbf1	f:6-49	LHC	5074 → 5074.1 → 5074.1.1
13	F	e9jpbF1	F:2-52	LHC	5074 → 5074.1 → 5074.1.1
14	g	e9jpbg1	g:6-49	LHC	5074 → 5074.1 → 5074.1.1
15	G	e9jpbG1	G:2-52	LHC	5074 → 5074.1 → 5074.1.1
16	H	e9jpbH1	H:1-34	PRCH	5002 → 5002.1 → 5002.1.1
17	H	e9jpbH2	H:35-256	Photosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain	4 → 4.6 → 4.6.1
18	i	e9jpbi1	i:7-49	LHC	5074 → 5074.1 → 5074.1.1
19	I	e9jpbI1	I:2-52	LHC	5074 → 5074.1 → 5074.1.1
20	j	e9jpbj1	j:7-49	LHC	5074 → 5074.1 → 5074.1.1
21	J	e9jpbJ1	J:2-51	LHC	5074 → 5074.1 → 5074.1.1
22	k	e9jpbk1	k:7-49	LHC	5074 → 5074.1 → 5074.1.1
23	K	e9jpbK1	K:2-52	LHC	5074 → 5074.1 → 5074.1.1
24	L	e9jpbL1	L:2-275	Photo_RC	5037 → 5037.1 → 5037.1.1
25	M	e9jpbM1	M:2-326	Photo_RC	5037 → 5037.1 → 5037.1.1
26	n	e9jpbn1	n:6-49	LHC	5074 → 5074.1 → 5074.1.1
27	N	e9jpbN1	N:2-52	LHC	5074 → 5074.1 → 5074.1.1
28	p	e9jpbp1	p:6-49	LHC	5074 → 5074.1 → 5074.1.1
29	P	e9jpbP1	P:1-51	LHC	5074 → 5074.1 → 5074.1.1
30	q	e9jpbq1	q:6-49	LHC	5074 → 5074.1 → 5074.1.1
31	Q	e9jpbQ1	Q:2-52	LHC	5074 → 5074.1 → 5074.1.1
32	r	e9jpbr1	r:7-49	LHC	5074 → 5074.1 → 5074.1.1
33	R	e9jpbR1	R:2-52	LHC	5074 → 5074.1 → 5074.1.1
34	s	e9jpbs1	s:6-49	LHC	5074 → 5074.1 → 5074.1.1
35	S	e9jpbS1	S:2-52	LHC	5074 → 5074.1 → 5074.1.1
36	t	e9jpbt1	t:7-49	LHC	5074 → 5074.1 → 5074.1.1
37	T	e9jpbT1	T:2-52	LHC	5074 → 5074.1 → 5074.1.1
38	v	e9jpbv1	v:10-49	LHC	5074 → 5074.1 → 5074.1.1
39	V	e9jpbV1	V:2-52	LHC	5074 → 5074.1 → 5074.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors