ECODEvolutionary Classification of Protein Domains

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PDB 9K3Q

35 chains36 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Light-harvesting protein B-870 beta chainview chain

1 domain

e9k3q101(1:12-55)

Chain 2Light-harvesting protein B-870 alpha chainview chain

1 domain

e9k3q201(2:2-46)

Chain 3Light-harvesting protein B-870 beta chainview chain

1 domain

e9k3q31(3:1-44)

Chain 4Light-harvesting protein B-870 alpha chainview chain

1 domain

e9k3q41(4:1-45)

Chain 5Light-harvesting protein B-870 beta chainview chain

1 domain

e9k3q51(5:1-44)

Chain 6Light-harvesting protein B-870 alpha chainview chain

1 domain

e9k3q61(6:1-45)

Chain 7Light-harvesting protein B-870 beta chainview chain

1 domain

e9k3q71(7:1-44)

Chain 8Light-harvesting protein B-870 alpha chainview chain

1 domain

e9k3q81(8:1-45)

Chain 9Light-harvesting protein B-870 beta chainview chain

1 domain

e9k3q91(9:1-44)

Chain ALight-harvesting protein B-870 alpha chainview chain

1 domain

e9k3qA1(A:1-45)

Chain dLight-harvesting protein B-870 beta chainview chain

1 domain

e9k3qd1(d:1-44)

Chain DLight-harvesting protein B-870 alpha chainview chain

1 domain

e9k3qD1(D:1-45)

Chain ELight-harvesting protein B-870 alpha chainview chain

1 domain

e9k3qE1(E:1-45)

Chain FLight-harvesting protein B-870 alpha chainview chain

1 domain

e9k3qF1(F:1-45)

Chain GLight-harvesting protein B-870 alpha chainview chain

1 domain

e9k3qG1(G:1-45)

Chain HPhotoreaction center protein Hview chain

2 domains

e9k3qH01(H:2-36)e9k3qH02(H:37-254)

Chain ILight-harvesting protein B-870 beta chainview chain

1 domain

e9k3qI1(I:1-44)

Chain JLight-harvesting protein B-870 alpha chainview chain

1 domain

e9k3qJ1(J:1-45)

Chain KLight-harvesting protein B-870 beta chainview chain

1 domain

e9k3qK1(K:1-44)

Chain LReaction center protein L chainview chain

1 domain

e9k3qL01(L:2-273)

Chain mLight-harvesting protein B-870 beta chainview chain

1 domain

e9k3qm1(m:1-44)

Chain MReaction center protein M chainview chain

1 domain

e9k3qM01(M:48-305)

Chain nLight-harvesting protein B-870 beta chainview chain

1 domain

e9k3qn1(n:1-44)

Chain NLight-harvesting protein B-870 alpha chainview chain

1 domain

e9k3qN1(N:1-45)

Chain OLight-harvesting protein B-870 beta chainview chain

1 domain

e9k3qO1(O:1-44)

Chain QLight-harvesting protein B-870 beta chainview chain

1 domain

e9k3qQ1(Q:1-44)

Chain RLight-harvesting protein B-870 alpha chainview chain

1 domain

e9k3qR1(R:1-45)

Chain SLight-harvesting protein B-870 beta chainview chain

1 domain

e9k3qS1(S:1-44)

Chain TLight-harvesting protein B-870 alpha chainview chain

1 domain

e9k3qT1(T:1-45)

Chain ULight-harvesting protein B-870 beta chainview chain

1 domain

e9k3qU1(U:1-44)

Chain VLight-harvesting protein B-870 alpha chainview chain

1 domain

e9k3qV1(V:1-45)

Chain WLight-harvesting protein B-870 beta chainview chain

1 domain

e9k3qW1(W:1-44)

Chain XLight-harvesting protein B-870 alpha chainview chain

1 domain

e9k3qX1(X:1-45)

Chain YLight-harvesting protein B-870 beta chainview chain

1 domain

e9k3qY1(Y:1-44)

Chain ZLight-harvesting protein B-870 alpha chainview chain

1 domain

e9k3qZ1(Z:1-45)

All Domains (36)

#	Chain	Domain ID	Range	Family	Classification
1	1	e9k3q101	1:12-55	LHC	5074 → 5074.1 → 5074.1.1
2	2	e9k3q201	2:2-46	LHC	5074 → 5074.1 → 5074.1.1
3	3	e9k3q31	3:1-44	LHC	5074 → 5074.1 → 5074.1.1
4	4	e9k3q41	4:1-45	LHC	5074 → 5074.1 → 5074.1.1
5	5	e9k3q51	5:1-44	LHC	5074 → 5074.1 → 5074.1.1
6	6	e9k3q61	6:1-45	LHC	5074 → 5074.1 → 5074.1.1
7	7	e9k3q71	7:1-44	LHC	5074 → 5074.1 → 5074.1.1
8	8	e9k3q81	8:1-45	LHC	5074 → 5074.1 → 5074.1.1
9	9	e9k3q91	9:1-44	LHC	5074 → 5074.1 → 5074.1.1
10	A	e9k3qA1	A:1-45	LHC	5074 → 5074.1 → 5074.1.1
11	d	e9k3qd1	d:1-44	LHC	5074 → 5074.1 → 5074.1.1
12	D	e9k3qD1	D:1-45	LHC	5074 → 5074.1 → 5074.1.1
13	E	e9k3qE1	E:1-45	LHC	5074 → 5074.1 → 5074.1.1
14	F	e9k3qF1	F:1-45	LHC	5074 → 5074.1 → 5074.1.1
15	G	e9k3qG1	G:1-45	LHC	5074 → 5074.1 → 5074.1.1
16	H	e9k3qH01	H:2-36	PRCH	5002 → 5002.1 → 5002.1.1
17	H	e9k3qH02	H:37-254	Photosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain	4 → 4.6 → 4.6.1
18	I	e9k3qI1	I:1-44	LHC	5074 → 5074.1 → 5074.1.1
19	J	e9k3qJ1	J:1-45	LHC	5074 → 5074.1 → 5074.1.1
20	K	e9k3qK1	K:1-44	LHC	5074 → 5074.1 → 5074.1.1
21	L	e9k3qL01	L:2-273	Photo_RC	5037 → 5037.1 → 5037.1.1
22	m	e9k3qm1	m:1-44	LHC	5074 → 5074.1 → 5074.1.1
23	M	e9k3qM01	M:48-305	Photo_RC	5037 → 5037.1 → 5037.1.1
24	n	e9k3qn1	n:1-44	LHC	5074 → 5074.1 → 5074.1.1
25	N	e9k3qN1	N:1-45	LHC	5074 → 5074.1 → 5074.1.1
26	O	e9k3qO1	O:1-44	LHC	5074 → 5074.1 → 5074.1.1
27	Q	e9k3qQ1	Q:1-44	LHC	5074 → 5074.1 → 5074.1.1
28	R	e9k3qR1	R:1-45	LHC	5074 → 5074.1 → 5074.1.1
29	S	e9k3qS1	S:1-44	LHC	5074 → 5074.1 → 5074.1.1
30	T	e9k3qT1	T:1-45	LHC	5074 → 5074.1 → 5074.1.1
31	U	e9k3qU1	U:1-44	LHC	5074 → 5074.1 → 5074.1.1
32	V	e9k3qV1	V:1-45	LHC	5074 → 5074.1 → 5074.1.1
33	W	e9k3qW1	W:1-44	LHC	5074 → 5074.1 → 5074.1.1
34	X	e9k3qX1	X:1-45	LHC	5074 → 5074.1 → 5074.1.1
35	Y	e9k3qY1	Y:1-44	LHC	5074 → 5074.1 → 5074.1.1
36	Z	e9k3qZ1	Z:1-45	LHC	5074 → 5074.1 → 5074.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors