ECODEvolutionary Classification of Protein Domains

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PDB 9KDU

80 chains18 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain LlLarge ribosomal subunit protein eL39-likeview chain

1 domain

e9kduLl1(Ll:2-49)

Chain LmUbiquitin-ribosomal protein eL40 fusion proteinview chain

1 domain

e9kduLm1(Lm:77-126)

Chain SCSmall ribosomal subunit protein uS5view chain

2 domains

e9kduSC1(SC:60-135)e9kduSC2(SC:136-274)

Chain SDSmall ribosomal subunit protein uS3view chain

2 domains

e9kduSD1(SD:4-100)e9kduSD2(SD:93-212)

Chain SFSmall ribosomal subunit protein uS7view chain

1 domain

e9kduSF1(SF:16-204)

Chain SGSmall ribosomal subunit protein eS6view chain

1 domain

e9kduSG1(SG:1-208)

Chain SHSmall ribosomal subunit protein eS7view chain

2 domains

e9kduSH1(SH:9-125)e9kduSH2(SH:119-191)

Chain SISmall ribosomal subunit protein eS8view chain

1 domain

e9kduSI1(SI:2-183)

Chain SJSmall ribosomal subunit protein uS4view chain

1 domain

e9kduSJ1(SJ:2-154)

Chain SKSmall ribosomal subunit protein eS10view chain

1 domain

e9kduSK1(SK:1-83)

Chain SLSmall ribosomal subunit protein uS17view chain

1 domain

e9kduSL1(SL:2-148)

Chain SPSmall ribosomal subunit protein uS19view chain

1 domain

e9kduSP1(SP:12-129)

Chain STSmall ribosomal subunit protein eS19view chain

1 domain

e9kduST1(ST:3-142)

Chain SVSmall ribosomal subunit protein eS21view chain

1 domain

e9kduSV1(SV:1-81)

Chain SYSmall ribosomal subunit protein eS24view chain

1 domain

e9kduSY1(SY:18-127)

All Domains (18)

#	Chain	Domain ID	Range	Family	Classification
1	Ll	e9kduLl1	Ll:2-49	Ribosomal_L39	585 → 585.1 → 585.1.1
2	Lm	e9kduLm1	Lm:77-126	Ribosomal_L40e	375 → 375.1 → 375.1.1
3	SC	e9kduSC1	SC:60-135	Ribosomal_S5	3274 → 3274.1 → 3274.1.1
4	SC	e9kduSC2	SC:136-274	Ribosomal_S5_C	212 → 212.1 → 212.1.1
5	SD	e9kduSD1	SD:4-100	KH_2	327 → 327.11 → 327.11.1
6	SD	e9kduSD2	SD:93-212	Ribosomal_S3_C	230 → 230.2 → 230.2.1
7	SF	e9kduSF1	SF:16-204	167.1.1.0	167 → 167.1 → 167.1.1
8	SG	e9kduSG1	SG:1-208	Ribosomal_S6e	239 → 239.1 → 239.1.1
9	SH	e9kduSH1	SH:9-125	Ribosomal_S7e	327 → 327.18 → 327.18.1
10	SH	e9kduSH2	SH:119-191	Ribosomal_S7e	327 → 327.18 → 327.18.1
11	SI	e9kduSI1	SI:2-183	Ribosomal_S8e	3174 → 3174.1 → 3174.1.1
12	SJ	e9kduSJ1	SJ:2-154	Ribosomal_S4,S4	221 → 221.1 → 221.1.2
13	SK	e9kduSK1	SK:1-83	S10_plectin	101 → 101.1 → 101.1.2
14	SL	e9kduSL1	SL:2-148	Ribosomal_S17,Ribosomal_S17_N	2 → 2.1 → 2.1.1
15	SP	e9kduSP1	SP:12-129	Ribosomal_S19	838 → 838.1 → 838.1.1
16	ST	e9kduST1	ST:3-142	Ribosomal_S19e	101 → 101.1 → 101.1.2
17	SV	e9kduSV1	SV:1-81	Ribosomal_S21e	3167 → 3167.1 → 3167.1.1
18	SY	e9kduSY1	SY:18-127	Ribosomal_S24e	304 → 304.109 → 304.109.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors