ECODEvolutionary Classification of Protein Domains

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PDB 9MQG

14 chains9 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain BTransmembrane protein gp41view chain

1 domain

e9mqgB1(B:7-35,B:61-153)

Chain ETransmembrane protein gp41view chain

1 domain

e9mqgE1(E:7-35,E:61-153)

Chain FTransmembrane protein gp41view chain

1 domain

e9mqgF1(F:7-35,F:61-153)

Chain GRM20A3 Fab light chainview chain

1 domain

e9mqgG1(G:1-108)

Chain IRM20A3 Fab heavy chainview chain

1 domain

e9mqgI1(I:1-123)

Chain JRM20A3 Fab light chainview chain

1 domain

e9mqgJ1(J:1-108)

Chain KRM20A3 Fab heavy chainview chain

1 domain

e9mqgK1(K:1-123)

Chain MRM20A3 Fab heavy chainview chain

1 domain

e9mqgM1(M:1-123)

Chain NRM20A3 Fab light chainview chain

1 domain

e9mqgN1(N:1-108)

All Domains (9)

#	Chain	Domain ID	Range	Family	Classification
1	B	e9mqgB1	B:7-35,B:61-153	GP41	3567 → 3567.1 → 3567.1.1
2	E	e9mqgE1	E:7-35,E:61-153	GP41	3567 → 3567.1 → 3567.1.1
3	F	e9mqgF1	F:7-35,F:61-153	GP41	3567 → 3567.1 → 3567.1.1
4	G	e9mqgG1	G:1-108	V-set	11 → 11.1 → 11.1.1
5	I	e9mqgI1	I:1-123	V-set	11 → 11.1 → 11.1.1
6	J	e9mqgJ1	J:1-108	V-set	11 → 11.1 → 11.1.1
7	K	e9mqgK1	K:1-123	V-set	11 → 11.1 → 11.1.1
8	M	e9mqgM1	M:1-123	V-set	11 → 11.1 → 11.1.1
9	N	e9mqgN1	N:1-108	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors