ECODEvolutionary Classification of Protein Domains

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PDB 9NH6

13 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ASmall nuclear ribonucleoprotein Sm D3view chain

1 domain

e9nh6A1(A:22-104)

Chain BSmall nuclear ribonucleoprotein-associated proteins B and B'view chain

1 domain

e9nh6B1(B:6-89)

Chain CU7 snRNA-associated Sm-like protein LSm10view chain

1 domain

e9nh6C1(C:1-114)

Chain ESmall nuclear ribonucleoprotein Eview chain

1 domain

e9nh6E1(E:18-92)

Chain FSmall nuclear ribonucleoprotein Fview chain

1 domain

e9nh6F1(F:7-81)

Chain GSmall nuclear ribonucleoprotein Gview chain

1 domain

e9nh6G1(G:4-80)

Chain HCleavage and polyadenylation specificity factor subunit 3view chain

3 domains

e9nh6H1(H:9-457)e9nh6H2(H:511-592)e9nh6H3(H:606-681)

Chain ICleavage and polyadenylation specificity factor subunit 2view chain

2 domains

e9nh6I1(I:207-386,I:519-540)e9nh6I2(I:2-206,I:541-637,I:697-702)

Chain JSymplekinview chain

1 domain

e9nh6J1(J:30-740)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e9nh6A1	A:22-104	LSM	4 → 4.1 → 4.1.1
2	B	e9nh6B1	B:6-89	LSM	4 → 4.1 → 4.1.1
3	C	e9nh6C1	C:1-114	LSM	4 → 4.1 → 4.1.1
4	E	e9nh6E1	E:18-92	LSM	4 → 4.1 → 4.1.1
5	F	e9nh6F1	F:7-81	LSM	4 → 4.1 → 4.1.1
6	G	e9nh6G1	G:4-80	LSM	4 → 4.1 → 4.1.1
7	H	e9nh6H1	H:9-457	Beta-Casp	247 → 247.1 → 247.1.1
8	H	e9nh6H2	H:511-592	CPSF73-100_C	331 → 331.10 → 331.10.2
9	H	e9nh6H3	H:606-681	CPSF73-100_C	247 → 247.1 → 247.1.1
10	I	e9nh6I1	I:207-386,I:519-540	Beta-Casp	2004 → 2004.1 → 2004.1.1
11	I	e9nh6I2	I:2-206,I:541-637,I:697-702	RMMBL,Lactamase_B_6	247 → 247.1 → 247.1.1
12	J	e9nh6J1	J:30-740	SYMPK_PTA1_N, Symplekin_C	109 → 109.4 → 109.4.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors