ECODEvolutionary Classification of Protein Domains

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PDB 9YDA

5 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AGenome polyprotein,Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLasview chain

1 domain

e9ydaA1(A:35-313)

Chain BGuanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1view chain

1 domain

e9ydaB1(B:8-340)

Chain GGuanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2view chain

1 domain

e9ydaG1(G:7-62)

Chain HscFv16view chain

2 domains

e9ydaH1(H:18-136)e9ydaH2(H:137-264)

Chain RMedium-wave-sensitive opsin 1view chain

1 domain

e9ydaR1(R:37-336)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e9ydaA1	A:35-313	G-alpha	2004 → 2004.1 → 2004.1.1
2	B	e9ydaB1	B:8-340	WD40, WD40_Gbeta	5 → 5.1 → 5.1.4
3	G	e9ydaG1	G:7-62	G-gamma	153 → 153.1 → 153.1.1
4	H	e9ydaH1	H:18-136	V-set	11 → 11.1 → 11.1.1
5	H	e9ydaH2	H:137-264	V-set	11 → 11.1 → 11.1.1
6	R	e9ydaR1	R:37-336	7tm_1, 7TM_GPCR_Srw	5001 → 5001.1 → 5001.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors