ECODEvolutionary Classification of Protein Domains

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PDB 9Z9L

12 chains14 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AQ23.MD39 Surface protein gp120view chain

2 domains

e9z9lA1(A:33-334)e9z9lA2(A:335-501)

Chain BQ23.MD39 Transmembrane protein gp41view chain

1 domain

e9z9lB1(B:518-661)

Chain CQ23.MD39 Surface protein gp120view chain

2 domains

e9z9lC1(C:33-333)e9z9lC2(C:334-500)

Chain DQ23.MD39 Transmembrane protein gp41view chain

1 domain

e9z9lD1(D:520-664)

Chain EAntibody 35O22 Fab heavy chainview chain

1 domain

e9z9lE1(E:2-113)

Chain FAntibody 35O22 Fab light chainview chain

1 domain

e9z9lF1(F:2-102)

Chain GQ23.MD39 Surface protein gp120view chain

2 domains

e9z9lG1(G:34-335)e9z9lG2(G:336-502)

Chain IQ23.MD39 Transmembrane protein gp41view chain

1 domain

e9z9lI1(I:520-659)

Chain JAntibody CH01 variable domain light chainview chain

1 domain

e9z9lJ1(J:1-105)

Chain KAntibody CH01 variable domain heavy chainview chain

1 domain

e9z9lK1(K:1-133)

Chain LAntibody 35O22 Fab light chainview chain

1 domain

e9z9lL1(L:2-107)

All Domains (14)

#	Chain	Domain ID	Range	Family	Classification
1	A	e9z9lA1	A:33-334	GP120	1061 → 1061.1 → 1061.1.1
2	A	e9z9lA2	A:335-501	GP120	259 → 259.1 → 259.1.1
3	B	e9z9lB1	B:518-661	GP41	3567 → 3567.1 → 3567.1.1
4	C	e9z9lC1	C:33-333	GP120	1061 → 1061.1 → 1061.1.1
5	C	e9z9lC2	C:334-500	GP120	259 → 259.1 → 259.1.1
6	D	e9z9lD1	D:520-664	GP41	3567 → 3567.1 → 3567.1.1
7	E	e9z9lE1	E:2-113	V-set	11 → 11.1 → 11.1.1
8	F	e9z9lF1	F:2-102	V-set	11 → 11.1 → 11.1.1
9	G	e9z9lG1	G:34-335	GP120	1061 → 1061.1 → 1061.1.1
10	G	e9z9lG2	G:336-502	GP120	259 → 259.1 → 259.1.1
11	I	e9z9lI1	I:520-659	GP41	3567 → 3567.1 → 3567.1.1
12	J	e9z9lJ1	J:1-105	V-set	11 → 11.1 → 11.1.1
13	K	e9z9lK1	K:1-133	V-set	11 → 11.1 → 11.1.1
14	L	e9z9lL1	L:2-107	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors