ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1gmyB1 - ECOD Domain | ECOD

ECOD/Domains/e1gmyB1

e1gmyB1

UID: 000082428

PDB

Range: B:0-252
PDB: 1GMY chain B(all domains)
UniProt: P07858 (all domains)
Gene: CTSB

Molecule: Cathepsin B (EC 3.4.22.1) (APP secretase) (APPS) (Cathepsin B1) [Cleaved into: Cathepsin B light chain; Cathepsin B heavy chain]

3D Structure

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Related Domains

Browse other domains in Peptidase_C1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C1(219.1.1.1)

Pfam Families

PF00112Peptidase_C1

Papain family cysteine protease

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 1GMY RCSB PDB: 1GMY PDBe: 1GMY UniProt: P07858

Downloads

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