ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yv5A1 - ECOD Domain | ECOD

ECOD/Domains/e1yv5A1

e1yv5A1

UID: 000279444

PDB

Range: A:27-364
PDB: 1YV5 chain A(all domains)
UniProt: P14324 (all domains)
Gene: FDPS

Molecule: Farnesyl pyrophosphate synthetase

3D Structure

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Related Domains

Browse other domains in polyprenyl_synt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilypolyprenyl_synt(141.1.1.1)

Ligands

in contact, ≤ 4 Å

Risedronic acidRIS
drugDrugBank DB00884
Magnesium ionMG
metal

+ 1 additive (Phosphate ion)

Pfam Families

PF00348polyprenyl_synt

Polyprenyl synthetase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 1YV5 RCSB PDB: 1YV5 PDBe: 1YV5 UniProt: P14324

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phosphate ionPO4

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.